RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 BMT2Q1RMZ1 405 aa20.33■□□□□ 0.85
HCG18-235ENST00000426882 SCUBE3Q8IX30 993 aa20.33■□□□□ 0.85
HCG18-235ENST00000426882 ZCCHC9Q8N567 271 aaKnown RBP20.33■□□□□ 0.85
HCG18-235ENST00000426882 PRELID2Q8N945 189 aa20.33■□□□□ 0.85
HCG18-235ENST00000426882 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
HCG18-235ENST00000426882 PRDM5Q9NQX1 630 aaPredicted RBP20.33■□□□□ 0.85
HCG18-235ENST00000426882 THRAP10827 490 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 KCNK10P57789 538 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 UBP1Q9NZI7 540 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 SLIT3O75094 1523 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 GPR182O15218 404 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 CYP1A2P05177 515 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 GRIK4Q16099 956 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 MRNIPQ6NTE8 343 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 CLEC4FQ8N1N0 589 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 PIDD1Q9HB75 910 aa20.33■□□□□ 0.84
HCG18-235ENST00000426882 STX7O15400 261 aaKnown RBP20.32■□□□□ 0.84
HCG18-235ENST00000426882 HYIQ5T013 277 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 RIC8BQ9NVN3 520 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 IRAK4Q9NWZ3 460 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 SHBGP04278 402 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 UBE2OQ9C0C9 1292 aaKnown RBP20.32■□□□□ 0.84
HCG18-235ENST00000426882 PCYOX1Q9UHG3 505 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 ACOT9Q9Y305 439 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 MRC1P22897 1456 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 FMO1Q01740 532 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 OPTNQ96CV9 577 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 NAF1Q96HR8 494 aaKnown RBP20.32■□□□□ 0.84
HCG18-235ENST00000426882 HES6Q96HZ4 224 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 C10orf88Q9H8K7 445 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 CTNNAL1Q9UBT7 734 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 TAGLN3Q9UI15 199 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 FZD1Q9UP38 647 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 APOC4-APOC2K7ER74 178 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 APOC2P02655 101 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 LHX1P48742 406 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 SEL1L3Q68CR1 1132 aa20.32■□□□□ 0.84
HCG18-235ENST00000426882 PURBQ96QR8 312 aaKnown RBP20.32■□□□□ 0.84
HCG18-235ENST00000426882 UBA1P22314 1058 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 MAMLD1Q13495 774 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 RRP1BQ14684 758 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 TDRD10Q5VZ19 366 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 MSL3Q8N5Y2 521 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 ATP6V1G2O95670 118 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 PTPRAP18433 802 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 GLRA2P23416 452 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 AKAP5P24588 427 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 ACAT1P24752 427 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 MAP4P27816 1152 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 RGS2P41220 211 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 SLC30A9Q6PML9 568 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 EFL1Q7Z2Z2 1120 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 CYGBQ8WWM9 190 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 GLT1D1Q96MS3 346 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 FGFBP2Q9BYJ0 223 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 EFCAB1Q9HAE3 211 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 GPBP1L1Q9HC44 474 aaPredicted RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 CYP4F12Q9HCS2 524 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 HSPA1AP0DMV8 641 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 HSPA1BP0DMV9 641 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 AMPD1P23109 780 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 HDAC4P56524 1084 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 APBB2Q92870 758 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 CINPQ9BW66 212 aaPredicted RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 APOL5Q9BWW9 433 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 VANGL2Q9ULK5 521 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 E9PBE3 544 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 KLHL41O60662 606 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 H2AFYO75367 372 aaKnown RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 KRT16P08779 473 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 ADIGQ0VDE8 80 aa20.31■□□□□ 0.84
HCG18-235ENST00000426882 TIGD7Q6NT04 549 aaPredicted RBP20.31■□□□□ 0.84
HCG18-235ENST00000426882 E5RJQ4 531 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 CXCL11O14625 94 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 SOAT2O75908 522 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 HMGCRP04035 888 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 YWHAZP63104 245 aaKnown RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 POU4F1Q01851 419 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 ITGB3BPQ13352 177 aaPredicted RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 FAM117BQ6P1L5 589 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 SLC27A1Q6PCB7 646 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 HTR3CQ8WXA8 447 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 APOPT1Q96IL0 206 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 FICDQ9BVA6 458 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 DTNAQ9Y4J8 743 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 TIMM13Q9Y5L4 95 aaPredicted RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 SGO1Q5FBB7 561 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 TUBGCP3Q96CW5 907 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 SRPK1Q96SB4 655 aaKnown RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 PIH1D1Q9NWS0 290 aaKnown RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 DDX43Q9NXZ2 648 aaKnown RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 SAE1Q9UBE0 346 aaPredicted RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 KIF1AQ12756 1690 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 ATP9AO75110 1047 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 MARSP56192 900 aaKnown RBP20.3■□□□□ 0.84
HCG18-235ENST00000426882 KBTBD12Q3ZCT8 623 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 HASPINQ8TF76 798 aa20.3■□□□□ 0.84
HCG18-235ENST00000426882 CCDC126Q96EE4 140 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms