RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 XYLBO75191 536 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 FAM200BP0CF97 657 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 RPL10AP62906 217 aaKnown RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 PLD1Q13393 1074 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 GOLGA7BQ2TAP0 167 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 LEXMQ3ZCV2 418 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ATAT1Q5SQI0 421 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ARHGAP17Q68EM7 881 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 CCNI2Q6ZMN8 369 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 PHF13Q86YI8 300 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 KRT222Q8N1A0 295 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ZMIZ2Q8NF64 920 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF606Q8WXB4 792 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ACBD3Q9H3P7 528 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 FAM53CQ9NYF3 392 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 USP15Q9Y4E8 981 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 SCINQ9Y6U3 715 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 NOTCH4Q99466 2003 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 O00370 1275 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 THAP12O43422 761 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 MBTPS2O43462 519 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 CFHP08603 1231 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 PTPN2P17706 415 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 TNFRSF8P28908 595 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 DNA2P51530 1060 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 KCNQ1P51787 676 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 GPS2Q13227 327 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 TAF12Q16514 161 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 PTCRAQ6ISU1 281 aaPredicted RBP16.39■□□□□ 0.21
SHOX2-202ENST00000425436 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 TTC30AQ86WT1 665 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 IFT20Q8IY31 132 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 ELMOD1Q8N336 334 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 EIF1ADQ8N9N8 165 aaKnown RBP16.39■□□□□ 0.21
SHOX2-202ENST00000425436 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.39■□□□□ 0.21
SHOX2-202ENST00000425436 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 DUSP16Q9BY84 665 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 RBM12Q9NTZ6 932 aaKnown RBP16.39■□□□□ 0.21
SHOX2-202ENST00000425436 STIM2Q9P246 746 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 THEGQ9P2T0 379 aa16.39■□□□□ 0.21
SHOX2-202ENST00000425436 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
SHOX2-202ENST00000425436 GREB1Q4ZG55 1949 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 TRIM66O15016 1216 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 DDX3YO15523 660 aaKnown RBP16.38■□□□□ 0.21
SHOX2-202ENST00000425436 MICAL2O94851 1124 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 PAPLNO95428 1278 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 CTNNA2P26232 953 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 IFRD2Q12894 506 aaPredicted RBP16.38■□□□□ 0.21
SHOX2-202ENST00000425436 SMAD4Q13485 552 aaKnown RBP16.38■□□□□ 0.21
SHOX2-202ENST00000425436 MESDQ14696 234 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 VEPH1Q14D04 833 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 CNGA2Q16280 664 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 LCLAT1Q6UWP7 414 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 CCDC26Q8TAB7 109 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 PSMG2Q969U7 264 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 C8orf48Q96LL4 319 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 CSNK1G1Q9HCP0 422 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
SHOX2-202ENST00000425436 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
SHOX2-202ENST00000425436 GOLGA6L10A0A0M3HER8 536 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 MYO1FO00160 1098 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 TULP2O00295 520 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 KRIT1O00522 736 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 NRG2O14511 850 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-202ENST00000425436 CALB1P05937 261 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 RHOP08100 348 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 MYL4P12829 197 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 HMGA1P17096 107 aaKnown RBP16.37■□□□□ 0.21
SHOX2-202ENST00000425436 NPR3P17342 541 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 COMTP21964 271 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 USP46P62068 366 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 NOMO3P69849 1222 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 CBX2Q14781 532 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-202ENST00000425436 NAA35Q5VZE5 725 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 MAATS1Q7Z4T9 603 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 SCAMP5Q8TAC9 235 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 SUSD6Q92537 303 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 SPATA17Q96L03 361 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 RIPOR3Q96MK2 946 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 POMKQ9H5K3 350 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 SLITRK6Q9H5Y7 841 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 ZNF334Q9HCZ1 680 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-202ENST00000425436 ADAM22Q9P0K1 906 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 HESX1Q9UBX0 185 aa16.37■□□□□ 0.21
SHOX2-202ENST00000425436 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.37■□□□□ 0.21
SHOX2-202ENST00000425436 FAM170AA1A519 330 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 M0QYV0 167 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 MAP2K7O14733 419 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 SPOPO43791 374 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 IL9P15248 144 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 GJA1P17302 382 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 MTHFRP42898 656 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 PDE4CQ08493 712 aa16.36■□□□□ 0.21
SHOX2-202ENST00000425436 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms