RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZSCAN5DPP0CG00 497 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 ETS1P14921 441 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 BDNFP23560 247 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 CAV1Q03135 178 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 VSIG1Q86XK7 387 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 OR2W6PQ8NHA6 318 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 FAM193BQ96PV7 902 aaPredicted RBP27.63■■■□□ 2.01
LDB1-202ENST00000425280 PCDHB7Q9Y5E2 793 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 ATN1P54259 1190 aaPredicted RBP27.63■■■□□ 2.01
LDB1-202ENST00000425280 PITX1P78337 314 aaPredicted RBP27.63■■■□□ 2.01
LDB1-202ENST00000425280 YWHAHQ04917 246 aaPredicted RBP27.63■■■□□ 2.01
LDB1-202ENST00000425280 TTMPQ5BVD1 217 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 ANKRD20A8PQ5CZ79 823 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 IZUMO3Q5VZ72 239 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 CCDC185Q8N715 623 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 BBOF1Q8ND07 529 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 NPY6RQ99463 290 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 POPDC2Q9HBU9 364 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 AAASQ9NRG9 546 aa27.63■■■□□ 2.01
LDB1-202ENST00000425280 PRG3Q9Y2Y8 225 aaPredicted RBP27.63■■■□□ 2.01
LDB1-202ENST00000425280 TET1Q8NFU7 2136 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 YJEFN3A6XGL0 299 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 E7ENQ6 273 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 SGK1O00141 431 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 L1CAMP32004 1257 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 TSPY1Q01534 308 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 SLMAPQ14BN4 828 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 DPYSL2Q16555 572 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 P3H1Q32P28 736 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 SYPL2Q5VXT5 272 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 NPNTQ6UXI9 565 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 BNIPLQ7Z465 357 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 PQLC3Q8N755 202 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 ZNF670Q9BS34 389 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 PABPC3Q9H361 631 aaKnown RBP27.62■■■□□ 2.01
LDB1-202ENST00000425280 C10orf88Q9H8K7 445 aa27.62■■■□□ 2.01
LDB1-202ENST00000425280 FYNP06241 537 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 USP17L7P0C7H9 530 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 EIF3EP60228 445 aaKnown RBP27.61■■■□□ 2.01
LDB1-202ENST00000425280 MAPRE1Q15691 268 aaKnown RBP27.61■■■□□ 2.01
LDB1-202ENST00000425280 CEP85LQ5SZL2 805 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 APBB2Q92870 758 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 FAF2Q96CS3 445 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 AP4E1Q9UPM8 1137 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 NLRC5Q86WI3 1866 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 RARGP13631 454 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 CHKAP35790 457 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 GATMP50440 423 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 PPP6R3Q5H9R7 873 aaPredicted RBP27.61■■■□□ 2.01
LDB1-202ENST00000425280 ABI1Q8IZP0 508 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 PCDH19Q8TAB3 1148 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.61■■■□□ 2.01
LDB1-202ENST00000425280 SCLYQ96I15 445 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 CASD1Q96PB1 797 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 MAGEB5Q9BZ81 275 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 SEMA4AQ9H3S1 761 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 DHX35Q9H5Z1 703 aaKnown RBP27.61■■■□□ 2.01
LDB1-202ENST00000425280 PCDH9Q9HC56 1237 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 MTMR10Q9NXD2 777 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 STAP1Q9ULZ2 295 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 NAALADL1Q9UQQ1 740 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 PTPRDP23468 1912 aa27.61■■■□□ 2.01
LDB1-202ENST00000425280 SCN5AQ14524 2016 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 ZNF487B1APH4 448 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 ZBED1O96006 694 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 ZNF844Q08AG5 666 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 NOMO1Q15155 1222 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 TERF2Q15554 542 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 CTU1Q7Z7A3 348 aaKnown RBP27.6■■■□□ 2.01
LDB1-202ENST00000425280 CCDC25Q86WR0 208 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 FAM131BQ86XD5 332 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 ADAM7Q9H2U9 754 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 FAM204AQ9H8W3 233 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 DMAP1Q9NPF5 467 aaPredicted RBP27.6■■■□□ 2.01
LDB1-202ENST00000425280 ADAM21Q9UKJ8 722 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 MCF2LO15068 1137 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 SLC9A4Q6AI14 798 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 HIBCHQ6NVY1 386 aaPredicted RBP27.6■■■□□ 2.01
LDB1-202ENST00000425280 BHLHA9Q7RTU4 235 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 ANKRD33Q7Z3H0 272 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 PLD5Q8N7P1 536 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 P3H4Q92791 437 aa27.6■■■□□ 2.01
LDB1-202ENST00000425280 KCTD15Q96SI1 283 aaPredicted RBP27.6■■■□□ 2.01
LDB1-202ENST00000425280 TANC1Q9C0D5 1861 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 IFNB1P01574 187 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 MNX1P50219 401 aaPredicted RBP27.59■■■□□ 2.01
LDB1-202ENST00000425280 GDF10P55107 478 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 GPS1Q13098 491 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 SLC39A5Q6ZMH5 540 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 HIPK3Q9H422 1215 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 NRDE2Q9H7Z3 1164 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 FZD10Q9ULW2 581 aa27.59■■■□□ 2.01
LDB1-202ENST00000425280 GOLGA6CA6NDK9 693 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 M0QYT0 321 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 DNALI1O14645 258 aaPredicted RBP27.58■■■□□ 2.01
LDB1-202ENST00000425280 APOL1O14791 398 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 OAZ2O95190 189 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 GOLGA6DP0CG33 693 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 RBP3P10745 1247 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 C1orf228Q6PIY5 440 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms