RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MORF4L2Q15014 288 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 EIF4HQ15056 248 aaKnown RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 EPHA7Q15375 998 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 GPR68Q15743 365 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 BAK1Q16611 211 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ATP2B3Q16720 1220 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 C3orf36Q3SXR2 165 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 DUSP28Q4G0W2 176 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 AGBL4Q5VU57 503 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ATG16L1Q676U5 607 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ESRP1Q6NXG1 681 aaKnown RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 DCLRE1AQ6PJP8 1040 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 PET117Q6UWS5 81 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 OTOP2Q7RTS6 562 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF804AQ7Z570 1209 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 POLNQ7Z5Q5 900 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 PXKQ7Z7A4 578 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 TMEM110Q86TL2 294 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 NME9Q86XW9 330 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 CCDC117Q8IWD4 279 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 HIPK4Q8NE63 616 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 DENND6BQ8NEG7 585 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 IPMKQ8NFU5 416 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 OR52K2Q8NGK3 314 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 GABPB2Q8TAK5 448 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ZFAND2BQ8WV99 257 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ASB15Q8WXK1 588 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF75CPQ92670 426 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 FAM162AQ96A26 154 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 RNF125Q96EQ8 232 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SLC35A4Q96G79 324 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 RUNDC3BQ96NL0 473 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 GBP5Q96PP8 586 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 GBP4Q96PP9 640 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 OR14A2Q96R54 314 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 DPYSL5Q9BPU6 564 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 AMNQ9BXJ7 453 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 TEX13BQ9BXU2 312 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ITPAQ9BY32 194 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ACE2Q9BYF1 805 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 ZCWPW1Q9H0M4 648 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 RNPEPQ9H4A4 650 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 NCOR1P1Q9H4R4 102 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 VPS37BQ9H9H4 285 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 COPS7BQ9H9Q2 264 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-205ENST00000424674 PDE7BQ9NP56 450 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SLC35C2Q9NQQ7 365 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 KCNH7Q9NS40 1196 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 CACNG4Q9UBN1 327 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 HPCAL4Q9UM19 191 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 TRIM17Q9Y577 477 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 PAXBP1Q9Y5B6 917 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 SLC30A1Q9Y6M5 507 aa3.99□□□□□ -1.77
SF3B1-205ENST00000424674 A0A0G2JNJ9 132 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 FAM234BA2RU67 622 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 A8MXE2 369 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 H0YC42 278 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 H3BUI4 141 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SH2B2O14492 632 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 VILLO15195 856 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 FOXP2O15409 715 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PRPSAP2O60256 369 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 KLHL41O60662 606 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 KERAO60938 352 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PIAS2O75928 621 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SLPIP03973 132 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 OPN1MWP04001 364 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 CLEC3BP05452 202 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 HEXBP07686 556 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 CLEC2LP0C7M8 214 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 OPN1MW2P0DN77 364 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 OPN1MW3P0DN78 364 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 KITP10721 976 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 EN2P19622 333 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 KCNA5P22460 613 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SP100P23497 879 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 ABCD3P28288 659 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 ACSL1P33121 698 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 TCF7P36402 384 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PSMB10P40306 273 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 EIF2DP41214 584 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 DPP6P42658 865 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 MEOX1P50221 254 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 GPC3P51654 580 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 HK3P52790 923 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SEC24CP53992 1094 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 RARSP54136 660 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 NKX6-1P78426 367 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 HTRA4P83105 476 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 DMTNQ08495 405 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 KLHL30Q0D2K2 578 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 COASYQ13057 564 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 NOGQ13253 232 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 MPP3Q13368 585 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 NFYCQ13952 458 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 TBR1Q16650 682 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 DEPDC1Q5TB30 811 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 KANK2Q63ZY3 851 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 TMEM200BQ69YZ2 307 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 CCDC62Q6P9F0 684 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms