RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 GRAMD4Q6IC98 578 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 TMEM25Q86YD3 366 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 OR6B3Q8NGW1 331 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 B3GNT5Q9BYG0 378 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 EIF3DO15371 548 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 GREM1O60565 184 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 IDEP14735 1019 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 TNNC1P63316 161 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 PSMD6Q15008 389 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 E2F5Q15329 346 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 PLEKHG6Q3KR16 790 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 EGFLAMQ63HQ2 1017 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 CHPFQ8IZ52 775 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 CADM4Q8NFZ8 388 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 MRGPRX1Q96LB2 322 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 CGRRF1Q99675 332 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 FGFBP2Q9BYJ0 223 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 DMAP1Q9NPF5 467 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 ZDHHC4Q9NPG8 344 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 FSCN3Q9NQT6 498 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 CACNA2D2Q9NY47 1150 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 HSPBP1Q9NZL4 362 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 PCDHGB2Q9Y5G2 931 aa16.49■□□□□ 0.23
RPUSD3-204ENST00000424438 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 A0A1B0GTW7 788 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 A8MXQ7 604 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 SCAMP3O14828 347 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 NDUFS2O75306 463 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 CST3P01034 146 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 NEFLP07196 543 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 SLC5A3P53794 718 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 GRIK2Q13002 908 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 KLHDC10Q6PID8 442 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 DBX2Q6ZNG2 339 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 NAT16Q8N8M0 369 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 BAHD1Q8TBE0 780 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 SMARCD1Q96GM5 515 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 TNIP3Q96KP6 325 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 UBL7Q96S82 380 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 XYLT2Q9H1B5 865 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 PCED1AQ9H1Q7 454 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 CYLDQ9NQC7 956 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 DNAJC17Q9NVM6 304 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 USP36Q9P275 1121 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 FBXO10Q9UK96 956 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 PCOLCE2Q9UKZ9 415 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 CYP8B1Q9UNU6 501 aa16.48■□□□□ 0.23
RPUSD3-204ENST00000424438 IGLV3-19P01714 112 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 C7P10643 843 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 CD6P30203 668 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 ENPP2Q13822 863 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 ANO4Q32M45 955 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 CNNM4Q6P4Q7 775 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 IL27RAQ6UWB1 636 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 TMPRSS7Q7RTY8 843 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 FAM35AQ86V20 835 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 OR2I1PQ8NGU4 316 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 SCFD1Q8WVM8 642 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 FBXO44Q9H4M3 255 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 CCSER2Q9H7U1 834 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 CSNK1G1Q9HCP0 422 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 WSB2Q9NYS7 404 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 SLC27A6Q9Y2P4 619 aa16.47■□□□□ 0.23
RPUSD3-204ENST00000424438 UBE4BO95155 1302 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CLDN5O00501 218 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 TLR5O60602 858 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CER1O95813 267 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CISD3P0C7P0 127 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 TYRP14679 529 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 TNNI1P19237 187 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 STAT6P42226 847 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 GOLGA8FQ08AF8 430 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 GOLGA8DPQ0D2H9 430 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 PAQR9Q6ZVX9 377 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 RGL4Q8IZJ4 473 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 ZNF276Q8N554 614 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 DEFB119Q8N690 84 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 SCAMP5Q8TAC9 235 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 NOC3LQ8WTT2 800 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 CAMK1GQ96NX5 476 aa16.46■□□□□ 0.23
RPUSD3-204ENST00000424438 KCNK16Q96T55 309 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms