RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 RRN3Q9NYV6 651 aa12.45□□□□□ -0.42
POLR1B-205ENST00000424062 CLIC5Q9NZA1 410 aa12.45□□□□□ -0.42
POLR1B-205ENST00000424062 CHD7Q9P2D1 2997 aa12.45□□□□□ -0.42
POLR1B-205ENST00000424062 COG5Q9UP83 839 aa12.45□□□□□ -0.42
POLR1B-205ENST00000424062 PATJQ8NI35 1801 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF197O14709 1029 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 DAB1O75553 588 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 RARGP13631 454 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 HOXB8P17481 243 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 CDC25CP30307 473 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 GBP1P32455 592 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF143P52747 638 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ACAP1Q15027 740 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 HABP4Q5JVS0 413 aaKnown RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 HECTD3Q5T447 861 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ANKRD54Q6NXT1 300 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 EP400NLQ6ZTU2 488 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 HFE2Q6ZVN8 426 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 PDZD4Q76G19 769 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 BHLHA9Q7RTU4 235 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 MICALL1Q8N3F8 863 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 C17orf53Q8N3J3 647 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 EMC1Q8N766 993 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 C12orf76Q8N812 135 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 VN1R2Q8NFZ6 395 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 TPCN2Q8NHX9 752 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 JOSD2Q8TAC2 188 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 FNIP1Q8TF40 1166 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 SMG7Q92540 1137 aaKnown RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 EDEM1Q92611 657 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 MRPS31Q92665 395 aaKnown RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 PIWIL1Q96J94 861 aaKnown RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ALS2CR12Q96Q35 445 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 SLC2A13Q96QE2 648 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 CNPY3Q9BT09 278 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 NACA2Q9H009 215 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 NMUR1Q9HB89 426 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 OLA1Q9NTK5 396 aaKnown RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 TMEM51Q9NW97 253 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 STAP1Q9ULZ2 295 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 NAALADL1Q9UQQ1 740 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 GREB1Q4ZG55 1949 aa12.44□□□□□ -0.42
POLR1B-205ENST00000424062 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 DPYSL4O14531 572 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 RNF8O76064 485 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 PROSCO94903 275 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 F9P00740 461 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 F11P03951 625 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 ZDHHC11BP0C7U3 371 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 GABRR2P28476 465 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 FLT3P36888 993 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 SLC1A1P43005 524 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 RBM10P98175 930 aaKnown RBP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 SLC25A52Q3SY17 297 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 CCDC14Q49A88 953 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 ARHGAP15Q53QZ3 475 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF569Q5MCW4 686 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 C10orf120Q5SQS8 335 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 RARS2Q5T160 578 aaKnown RBP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 SNX30Q5VWJ9 437 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 TMC5Q6UXY8 1006 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 SND1Q7KZF4 910 aaKnown RBP eCLIP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 DAAM2Q86T65 1068 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF276Q8N554 614 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 ATXN3LQ9H3M9 355 aa12.43□□□□□ -0.42
POLR1B-205ENST00000424062 ZNF334Q9HCZ1 680 aaPredicted RBP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 DNMT3BQ9UBC3 853 aaKnown RBP12.43□□□□□ -0.42
POLR1B-205ENST00000424062 M0QYT0 321 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 LINC01565O15544 149 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
POLR1B-205ENST00000424062 TLR5O60602 858 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 PALMO75781 387 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 PAPLNO95428 1278 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 FYNP06241 537 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 RHOP08100 348 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 DDX6P26196 483 aaKnown RBP eCLIP12.42□□□□□ -0.42
POLR1B-205ENST00000424062 ATP5C1P36542 298 aaKnown RBP12.42□□□□□ -0.42
POLR1B-205ENST00000424062 SSR1P43307 286 aaKnown RBP12.42□□□□□ -0.42
POLR1B-205ENST00000424062 PTPN9P43378 593 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 PGFP49763 221 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 SULT1E1P49888 294 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 EPHA5P54756 1037 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 GNG11P61952 73 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 ATP11AP98196 1134 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 ATAT1Q5SQI0 421 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 CES5AQ6NT32 575 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
POLR1B-205ENST00000424062 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
POLR1B-205ENST00000424062 TMC8Q8IU68 726 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms