RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RIPPLY1Q0D2K3 151 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CAPRIN1Q14444 709 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 HADHQ16836 314 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ALG11Q2TAA5 492 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 IQCCQ4KMZ1 466 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TPGS2Q68CL5 300 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 C17orf99Q6UX52 265 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FBXO33Q7Z6M2 555 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 AFAP1L2Q8N4X5 818 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TUBGCP3Q96CW5 907 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 JAKMIP1Q96N16 626 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CTAGE1Q96RT6 745 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MRIQ9BWK5 157 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 NT5C1AQ9BXI3 368 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CLEC1BQ9P126 229 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PCDHA12Q9UN75 941 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CRYL1Q9Y2S2 319 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.7□□□□□ -1.828e-8■■□□□ 11.4
TOP2A-201ENST00000423485 WASF2Q9Y6W5 498 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TRGV8A0A0C4DH27 118 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 KLF18A0A0U1RQI7 1052 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SRRM3A6NNA2 597 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TMEM110-MUSTN1A8MSY1 372 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GRXCR1A8MXD5 290 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TTI1O43156 1089 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SNX2O60749 519 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 VIPP01282 170 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ALDOAP04075 364 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ASGR2P07307 311 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ADORA1P30542 326 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GHRHRQ02643 423 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TFF2Q03403 129 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FUT2Q10981 343 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 XRCC4Q13426 336 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TUBB2AQ13885 445 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GRM4Q14833 912 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 NDUFA9Q16795 377 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CCDC122Q5T0U0 273 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF776Q68DI1 518 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RTL10Q7L3V2 364 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 APTXQ7Z2E3 356 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TMEM110Q86TL2 294 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MAP7D3Q8IWC1 876 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DHX40Q8IX18 779 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 COLGALT2Q8IYK4 626 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RNF214Q8ND24 703 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 VN1R2Q8NFZ6 395 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.7□□□□□ -1.823e-7■■□□□ 12.9
TOP2A-201ENST00000423485 WDR36Q8NI36 951 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DNASE1L2Q92874 299 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF512BQ96KM6 892 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 OSMRQ99650 979 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TUBB2BQ9BVA1 445 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 POLR3FQ9H1D9 316 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DPEP2Q9H4A9 486 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PHPT1Q9NRX4 125 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 HCN2Q9UL51 889 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FZD1Q9UP38 647 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 JRKLQ9Y4A0 524 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 COL4A3BPQ9Y5P4 624 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DOCK6Q96HP0 2047 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 A0A087WWV3 80 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MASP2O00187 686 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZBTB5O15062 677 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SGSM2O43147 1006 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GPAA1O43292 621 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 B4GAT1O43505 415 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 LRP3O75074 770 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GMNNO75496 209 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 IL18RAPO95256 599 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PLEKP08567 350 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CCNE1P24864 410 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 KLRC1P26715 233 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PPP1R2P41236 205 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 WASP42768 502 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FXR1P51114 621 aaKnown RBP eCLIP3.7□□□□□ -1.828e-7■■■□□ 16
TOP2A-201ENST00000423485 BNC1Q01954 994 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 IQCB1Q15051 598 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CATSPEREQ5SY80 951 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZC3H18Q86VM9 953 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 KBTBD3Q8NAB2 608 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RDM1Q8NG50 284 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 BHMTQ93088 406 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TMA16Q96EY4 203 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 LIN37Q96GY3 246 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZKSCAN3Q9BRR0 538 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TWSG1Q9GZX9 223 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SEMA4GQ9NTN9 838 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZDHHC7Q9NXF8 308 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 VPS28Q9UK41 221 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SNX7Q9UNH6 387 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MTMR6Q9Y217 621 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GIT1Q9Y2X7 761 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TANC1Q9C0D5 1861 aa3.69□□□□□ -1.82
TOP2A-201ENST00000423485 ARHGAP10A1A4S6 786 aa3.69□□□□□ -1.82
TOP2A-201ENST00000423485 CAPN14A8MX76 684 aa3.69□□□□□ -1.82
TOP2A-201ENST00000423485 P4HA2O15460 535 aa3.69□□□□□ -1.82
TOP2A-201ENST00000423485 F11P03951 625 aa3.69□□□□□ -1.82
TOP2A-201ENST00000423485 IQCF3P0C7M6 154 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms