RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 NUP62CLQ9H1M0 184 aa18.99■□□□□ 0.63
UBXN11-208ENST00000421827 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
UBXN11-208ENST00000421827 LMBRD1Q9NUN5 540 aa18.99■□□□□ 0.63
UBXN11-208ENST00000421827 TULP2O00295 520 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 MDM4O15151 490 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 GREM1O60565 184 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 ZBED1O96006 694 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 SETSIPP0DME0 302 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 ADH5P11766 374 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 HOXA6P31267 233 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 EIF2DP41214 584 aaKnown RBP18.98■□□□□ 0.63
UBXN11-208ENST00000421827 PLA2G4AP47712 749 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 FNTBP49356 437 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 GAD2Q05329 585 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 DMWDQ09019 674 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 LCLAT1Q6UWP7 414 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 LONP2Q86WA8 852 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 CREBRFQ8IUR6 639 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 UBA3Q8TBC4 463 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 TFAP2BQ92481 460 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 SPHK2Q9NRA0 654 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 LSM7Q9UK45 103 aaKnown RBP18.98■□□□□ 0.63
UBXN11-208ENST00000421827 SLC8A2Q9UPR5 921 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 GVINP1Q7Z2Y8 2422 aa18.98■□□□□ 0.63
UBXN11-208ENST00000421827 ATG2BQ96BY7 2078 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 GPR179Q6PRD1 2367 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 RNF225M0QZC1 329 aaPredicted RBP18.97■□□□□ 0.63
UBXN11-208ENST00000421827 SLC6A11P48066 632 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 TPD52L1Q16890 204 aaPredicted RBP18.97■□□□□ 0.63
UBXN11-208ENST00000421827 HEATR6Q6AI08 1181 aaKnown RBP18.97■□□□□ 0.63
UBXN11-208ENST00000421827 PM20D1Q6GTS8 502 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 IRF2BP1Q8IU81 584 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 RBBP8NLQ8NC74 664 aaPredicted RBP18.97■□□□□ 0.63
UBXN11-208ENST00000421827 RPLP0P6Q8NHW5 317 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 RUBCNQ92622 972 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 KREMEN1Q96MU8 473 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 PNKPQ96T60 521 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 LRRC4Q9HBW1 653 aa18.97■□□□□ 0.63
UBXN11-208ENST00000421827 OTOGLQ3ZCN5 2332 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 K7EQS6 105 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 HOXC13P31276 330 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 ZNF132P52740 706 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 YWHAGP61981 247 aaKnown RBP eCLIP18.96■□□□□ 0.63
UBXN11-208ENST00000421827 STILQ15468 1287 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 CNGA2Q16280 664 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 DPCR1Q3MIW9 517 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 PKDCCQ504Y2 493 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 C12orf40Q86WS4 652 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 MIB1Q86YT6 1006 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 KCTD13Q8WZ19 329 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 ACDQ96AP0 544 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 HINFPQ9BQA5 517 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 ZSWIM1Q9BR11 485 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 ULBP1Q9BZM6 244 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.96■□□□□ 0.63
UBXN11-208ENST00000421827 SMG5Q9UPR3 1016 aaKnown RBP18.96■□□□□ 0.63
UBXN11-208ENST00000421827 ZNF292O60281 2723 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 MYOFQ9NZM1 2061 aa18.96■□□□□ 0.63
UBXN11-208ENST00000421827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 HOXC11O43248 304 aaPredicted RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 BRD2P25440 801 aaKnown RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 CNR2P34972 360 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 MTIF2P46199 727 aaKnown RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 SEC13P55735 322 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 COG7P83436 770 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 ADIGQ0VDE8 80 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 EFEMP1Q12805 493 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 ANO4Q32M45 955 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 BTBD8Q5XKL5 378 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 SYT13Q7L8C5 426 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 WDR5BQ86VZ2 330 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 TMEM25Q86YD3 366 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 USP33Q8TEY7 942 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 CRACR2AQ9BSW2 395 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 THAP9Q9H5L6 903 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 UBE2TQ9NPD8 197 aaPredicted RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 ARHGEF4Q9NR80 690 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 POLR3BQ9NW08 1133 aaPredicted RBP18.95■□□□□ 0.62
UBXN11-208ENST00000421827 DACH1Q9UI36 760 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 RASAL2Q9UJF2 1139 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 CNTN6Q9UQ52 1028 aa18.95■□□□□ 0.62
UBXN11-208ENST00000421827 A0A0A0MRY4 1105 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 M0QYV0 167 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 STC2O76061 302 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 KAT7O95251 611 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 CALCAP01258 141 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 APODP05090 189 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 ERCC5P28715 1186 aaPredicted RBP18.94■□□□□ 0.62
UBXN11-208ENST00000421827 GRIA2P42262 883 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 KDSRQ06136 332 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 MESP2Q0VG99 397 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 TRIM65Q6PJ69 517 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 GBP6Q6ZN66 633 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 Q6ZNB5 142 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 RSRC2Q7L4I2 434 aaKnown RBP18.94■□□□□ 0.62
UBXN11-208ENST00000421827 ENOSF1Q7L5Y1 443 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 BHLHA9Q7RTU4 235 aa18.94■□□□□ 0.62
UBXN11-208ENST00000421827 ETFBKMTQ8IXQ9 262 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms