RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 DEFB106AQ8N104 65 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 NME8Q8N427 588 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 NAT8LQ8N9F0 302 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 CCNYQ8ND76 341 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDX56-203ENST00000421223 TBCBQ99426 244 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 LRRC4Q9HBW1 653 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 SIP14410 1827 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 C5orf60A6NFR6 353 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 CASTOR2A6NHX0 329 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 FAM155BO75949 473 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 BEST1O76090 585 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 IL4RP24394 825 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 TKTP29401 623 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 PTPN7P35236 360 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 MLH1P40692 756 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SULT1E1P49888 294 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 CPT1AP50416 773 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 MAP3K7CLP57077 242 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 GEMIN4P57678 1058 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 LILRA4P59901 499 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 NOMO1Q15155 1222 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 STILQ15468 1287 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 MDH1BQ5I0G3 518 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 CASC4Q6P4E1 433 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 TTC39CQ8N584 583 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 PQLC3Q8N755 202 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 PPM1NQ8N819 430 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 FOXP3Q9BZS1 431 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 CAPN9O14815 690 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 CD4P01730 458 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ATP2A2P16615 1042 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 GOT1P17174 413 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SCTRP47872 440 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 BCAT1P54687 386 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SLC8A3P57103 927 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ACAP1Q15027 740 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ZBTB6Q15916 424 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 TMEM110Q86TL2 294 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 OSTM1Q86WC4 334 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SUGP1Q8IWZ8 645 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 ANKRD52Q8NB46 1076 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 CKAP2Q8WWK9 683 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ETNK2Q9NVF9 386 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 PSMC3IPQ9P2W1 217 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 EFR3BQ9Y2G0 817 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 INPP5FQ9Y2H2 1132 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 MYO18AQ92614 2054 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 M0QZ92 97 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SNX3O60493 162 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 STIP1P31948 543 aaKnown RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 ACTN3Q08043 901 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 SLC1A5Q15758 541 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 KBTBD12Q3ZCT8 623 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 TRPM8Q7Z2W7 1104 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 TBC1D1Q86TI0 1168 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 LRRC52Q8N7C0 313 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 CCDC63Q8NA47 563 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ZNF560Q96MR9 790 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 SLC45A1Q9Y2W3 748 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 USP15Q9Y4E8 981 aaPredicted RBP11.38□□□□□ -0.59
DDX56-203ENST00000421223 ANK1P16157 1881 aa11.38□□□□□ -0.59
DDX56-203ENST00000421223 XPOTO43592 962 aaKnown RBP11.37□□□□□ -0.59
DDX56-203ENST00000421223 SUN1O94901 812 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 INHBAP08476 426 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 GRIA1P42261 906 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 SNX16P57768 344 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 CRADDP78560 199 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 LVRNQ6Q4G3 990 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 DSTYKQ6XUX3 929 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 SPATA21Q7Z572 469 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 PIGWQ7Z7B1 504 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 SIX6OS1Q8N1H7 587 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 B3GALNT2Q8NCR0 500 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 LGMNQ99538 433 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 WDR83Q9BRX9 315 aaKnown RBP11.37□□□□□ -0.59
DDX56-203ENST00000421223 NRDE2Q9H7Z3 1164 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 UBN1Q9NPG3 1134 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 LRRC37A2A6NM11 1700 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 M0QYT0 321 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 UBOX5O94941 541 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
DDX56-203ENST00000421223 AP1B1Q10567 949 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 PDK2Q15119 407 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 UBXN11Q5T124 520 aa11.37□□□□□ -0.59
DDX56-203ENST00000421223 ICE2Q659A1 982 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms