RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CATSPERBQ9H7T0 1116 aa7.72□□□□□ -1.17
BDNF-209ENST00000420794 SALL4Q9UJQ4 1053 aa7.72□□□□□ -1.17
BDNF-209ENST00000420794 IKBKGQ9Y6K9 419 aa7.72□□□□□ -1.17
BDNF-209ENST00000420794 DPYSL4O14531 572 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 PPP1R12AO14974 1030 aaPredicted RBP7.71□□□□□ -1.17
BDNF-209ENST00000420794 CFHP08603 1231 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 GBP2P32456 591 aaPredicted RBP7.71□□□□□ -1.17
BDNF-209ENST00000420794 ZNF135P52742 658 aaPredicted RBP7.71□□□□□ -1.17
BDNF-209ENST00000420794 WDR5P61964 334 aaKnown RBP7.71□□□□□ -1.17
BDNF-209ENST00000420794 MTMR3Q13615 1198 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 PRPSAP1Q14558 356 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 PPM1LQ5SGD2 360 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 ARHGEF18Q6ZSZ5 1173 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 SYDE1Q6ZW31 735 aaPredicted RBP7.71□□□□□ -1.17
BDNF-209ENST00000420794 JOSD2Q8TAC2 188 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 KCTD13Q8WZ19 329 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 SLC28A3Q9HAS3 691 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 COG5Q9UP83 839 aa7.71□□□□□ -1.17
BDNF-209ENST00000420794 CCDC151A5D8V7 595 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 GABRDO14764 452 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 PAPSS1O43252 624 aaPredicted RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 XYLBO75191 536 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 SOD2P04179 222 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 SLC11A2P49281 568 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 SLC5A3P53794 718 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 EIF3EP60228 445 aaKnown RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 SLC7A5Q01650 507 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 ROR1Q01973 937 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 GPR17Q13304 367 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 C15orf59Q2T9L4 293 aaPredicted RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 HEATR6Q6AI08 1181 aaKnown RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 DPY19L2P1Q6NXN4 242 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 LLGL2Q6P1M3 1020 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 C1orf228Q6PIY5 440 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 PRSS55Q6UWB4 352 aaPredicted RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 PPP1R21Q6ZMI0 780 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 SPOCD1Q6ZMY3 1216 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 STRADAQ7RTN6 431 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 UBLCP1Q8WVY7 318 aaPredicted RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 PARD6BQ9BYG5 372 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 UBE2OQ9C0C9 1292 aaKnown RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 ABCB6Q9NP58 842 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 RBM12Q9NTZ6 932 aaKnown RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 AMACRQ9UHK6 382 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 SLC12A8A0AV02 714 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 OAZ2O95190 189 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 TRUB2O95900 331 aaKnown RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 PYGMP11217 842 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 EPHB2P29323 1055 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 MCCD1P59942 119 aaPredicted RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 ITIH3Q06033 890 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 DSC1Q08554 894 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 SLC25A52Q3SY17 297 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 CCDC14Q49A88 953 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 UNC45BQ8IWX7 931 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 MMGT1Q8N4V1 131 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 UBR7Q8N806 425 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 LRRC57Q8N9N7 239 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 KRT35Q92764 455 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 ACSF2Q96CM8 615 aaPredicted RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 KCNK16Q96T55 309 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 LPIN3Q9BQK8 851 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 GPR62Q9BZJ7 368 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 UBXN6Q9BZV1 441 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 PNPLA8Q9NP80 782 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 AFF4Q9UHB7 1163 aaKnown RBP7.71□□□□□ -1.18
BDNF-209ENST00000420794 ANAPC5Q9UJX4 755 aa7.71□□□□□ -1.18
BDNF-209ENST00000420794 TARSL2A2RTX5 802 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 CFAP69A5D8W1 941 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 OPA1O60313 960 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 GLUD1P00367 558 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 FNTAP49354 379 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 NDUFV1P49821 464 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 EPHB4P54760 987 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 PLTPP55058 493 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 TBX4P57082 545 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 BYSLQ13895 437 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 CHSY1Q86X52 802 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 RUBCNQ92622 972 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 SMARCAL1Q9NZC9 954 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 SH3BP1Q9Y3L3 701 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 CASP8AP2Q9UKL3 1982 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 HCRTO43612 131 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 ZMYND10O75800 440 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 DGKIO75912 1065 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 CKMP06732 381 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 ATP5C1P36542 298 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 FLT3P36888 993 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 PTPN9P43378 593 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 DAOAP59103 153 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 ITKQ08881 620 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 SDHAF4Q5VUM1 108 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 ZC3H18Q86VM9 953 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 TMEM130Q8N3G9 435 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 C3orf58Q8NDZ4 430 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 GSTCDQ8NEC7 633 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 PHOSPHO2Q8TCD6 241 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 B3GALT6Q96L58 329 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms