RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 KMT2BQ9UMN6 2715 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 A0A0A0MRY4 1105 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 PSMA7O14818 248 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 CYP26A1O43174 497 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 HOXC11O43248 304 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 RALAP11233 206 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 HOXC13P31276 330 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 SLC6A11P48066 632 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 CRY1Q16526 586 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 AASDHQ4L235 1098 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 EOGTQ5NDL2 527 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 PPP1R26Q5T8A7 1209 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 HTR3DQ70Z44 454 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 BBS7Q8IWZ6 715 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 KCNV2Q8TDN2 545 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 TMEM176AQ96HP8 235 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 XPO6Q96QU8 1125 aaKnown RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 CISHQ9NSE2 258 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 ARMCX3Q9UH62 379 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-202ENST00000420482 NAGPAQ9UK23 515 aa22.48■■□□□ 1.19
PTPN4-202ENST00000420482 KIAA1549LQ6ZVL6 1849 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 TBC1D3BA6NDS4 549 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 HHLA1C9JL84 531 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 ZNF806P0C7X5 589 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 GBP1P32455 592 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 PLA2G4AP47712 749 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 KIF11P52732 1056 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 KDSRQ06136 332 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 GPRIN1Q7Z2K8 1008 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 ARHGAP18Q8N392 663 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 CCDC33Q8N5R6 958 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 ENGASEQ8NFI3 743 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 WHAMMQ8TF30 809 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 DDX1Q92499 740 aaKnown RBP22.47■■□□□ 1.19
PTPN4-202ENST00000420482 CNOT6LQ96LI5 555 aaKnown RBP22.47■■□□□ 1.19
PTPN4-202ENST00000420482 KLF16Q9BXK1 252 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-202ENST00000420482 METTL14Q9HCE5 456 aaKnown RBP22.47■■□□□ 1.19
PTPN4-202ENST00000420482 POLR3BQ9NW08 1133 aaPredicted RBP22.47■■□□□ 1.19
PTPN4-202ENST00000420482 WDR35Q9P2L0 1181 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 MYO16Q9Y6X6 1858 aa22.47■■□□□ 1.19
PTPN4-202ENST00000420482 A0A1W2PQH9 124 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 SLC30A4O14863 429 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 RARGP13631 454 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 TIE1P35590 1138 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 PLK5Q496M5 336 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 C10orf120Q5SQS8 335 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 ANO7Q6IWH7 933 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 CCDC186Q7Z3E2 898 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 ZNF276Q8N554 614 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 ALLCQ8N6M5 410 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 TXNDC5Q8NBS9 432 aaKnown RBP22.46■■□□□ 1.19
PTPN4-202ENST00000420482 SPATA20Q8TB22 786 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 SEMA4DQ92854 862 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 UBXN6Q9BZV1 441 aa22.46■■□□□ 1.19
PTPN4-202ENST00000420482 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.46■■□□□ 1.19
PTPN4-202ENST00000420482 DCDC2BA2VCK2 349 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 TULP3O75386 442 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 KLF8O95600 359 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-202ENST00000420482 TBX18O95935 607 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 BYSLQ13895 437 aaKnown RBP22.45■■□□□ 1.18
PTPN4-202ENST00000420482 ANKRD40Q6AI12 368 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 RASSF3Q86WH2 238 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 C12orf40Q86WS4 652 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 TTC30AQ86WT1 665 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 ELOA2Q8IYF1 753 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-202ENST00000420482 NAT16Q8N8M0 369 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 IL17RCQ8NAC3 791 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 DHTKD1Q96HY7 919 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-202ENST00000420482 VPS45Q9NRW7 570 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 CLIC5Q9NZA1 410 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 BCCIPQ9P287 314 aaKnown RBP eCLIP22.45■■□□□ 1.18
PTPN4-202ENST00000420482 ZNF510Q9Y2H8 683 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 COQ4Q9Y3A0 265 aa22.45■■□□□ 1.18
PTPN4-202ENST00000420482 CNOT1A5YKK6 2376 aaKnown RBP22.44■■□□□ 1.18
PTPN4-202ENST00000420482 ZBTB24O43167 697 aaPredicted RBP22.44■■□□□ 1.18
PTPN4-202ENST00000420482 MPLP40238 635 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 COG7P83436 770 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 CETN1Q12798 172 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 IL31Q6EBC2 164 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 GRAMD4Q6IC98 578 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 TMEM25Q86YD3 366 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 ETFBKMTQ8IXQ9 262 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 ZC3H3Q8IXZ2 948 aaKnown RBP22.44■■□□□ 1.18
PTPN4-202ENST00000420482 SLC4A11Q8NBS3 891 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 SPACA7Q96KW9 195 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 CNTNAP3BQ96NU0 1288 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 BBS2Q9BXC9 721 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 CNTNAP3Q9BZ76 1288 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 TPSD1Q9BZJ3 242 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 DUSP15Q9H1R2 295 aaPredicted RBP22.44■■□□□ 1.18
PTPN4-202ENST00000420482 HESX1Q9UBX0 185 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 USP3Q9Y6I4 520 aa22.44■■□□□ 1.18
PTPN4-202ENST00000420482 SDK1Q7Z5N4 2213 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 NEDD8-MDP1E9PL57 170 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 TBXAS1P24557 533 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-202ENST00000420482 PGFP49763 221 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 RAD23BP54727 409 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 CUL2Q13617 745 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 CBWD6Q4V339 395 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms