RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 TRMT11Q7Z4G4 463 aaKnown RBP18.26■□□□□ 0.51
PTCD1-202ENST00000419981 ZNF513Q8N8E2 541 aaPredicted RBP18.26■□□□□ 0.51
PTCD1-202ENST00000419981 WBP2Q969T9 261 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 JAKMIP2Q96AA8 810 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 TWNKQ96RR1 684 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 HNRNPABQ99729 332 aaKnown RBP18.26■□□□□ 0.51
PTCD1-202ENST00000419981 DEC1Q9P2X7 70 aa18.26■□□□□ 0.51
PTCD1-202ENST00000419981 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
PTCD1-202ENST00000419981 TCRBV21S2A2A0A5A6 115 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 LNP1A1A4G5 178 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 KHNYNO15037 678 aaKnown RBP18.25■□□□□ 0.51
PTCD1-202ENST00000419981 ADAM23O75077 832 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 KRT13P13646 458 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 ATP5C1P36542 298 aaKnown RBP18.25■□□□□ 0.51
PTCD1-202ENST00000419981 P2RY2P41231 377 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 NDUFA8P51970 172 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 DPYDQ12882 1025 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 N4BP2L1Q5TBK1 243 aaPredicted RBP18.25■□□□□ 0.51
PTCD1-202ENST00000419981 HTR3DQ70Z44 454 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 GPRIN1Q7Z2K8 1008 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 TMEM25Q86YD3 366 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 FAM186BQ8IYM0 893 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 PGBD3Q8N328 593 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 TERB1Q8NA31 727 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 KCNV2Q8TDN2 545 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 HMGB4Q8WW32 186 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 RLN3Q8WXF3 142 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 CYFIP2Q96F07 1278 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 CHAMP1Q96JM3 812 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 NT5C1AQ9BXI3 368 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 KLF16Q9BXK1 252 aaPredicted RBP18.25■□□□□ 0.51
PTCD1-202ENST00000419981 CYP3A43Q9HB55 503 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 PNPLA8Q9NP80 782 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 CYLDQ9NQC7 956 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 LSM7Q9UK45 103 aaKnown RBP18.25■□□□□ 0.51
PTCD1-202ENST00000419981 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 SCML2Q9UQR0 700 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 PCDHA5Q9Y5H7 936 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 KMT2BQ9UMN6 2715 aaPredicted RBP18.25■□□□□ 0.51
PTCD1-202ENST00000419981 CKAP5Q14008 2032 aa18.25■□□□□ 0.51
PTCD1-202ENST00000419981 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 HHLA1C9JL84 531 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 CYP26A1O43174 497 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 MAP3K13O43283 966 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 KCNK5O95279 499 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 ACO1P21399 889 aaKnown RBP18.24■□□□□ 0.51
PTCD1-202ENST00000419981 RPL13P26373 211 aaKnown RBP18.24■□□□□ 0.51
PTCD1-202ENST00000419981 PMLP29590 882 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 GCLMP48507 274 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 ENPEPQ07075 957 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 BYSLQ13895 437 aaKnown RBP18.24■□□□□ 0.51
PTCD1-202ENST00000419981 C10orf76Q5T2E6 689 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 LPCAT2Q7L5N7 544 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 GUF1Q8N442 669 aaKnown RBP18.24■□□□□ 0.51
PTCD1-202ENST00000419981 CCDC150Q8NCX0 1101 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 TAS1R2Q8TE23 839 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 DNAI2Q9GZS0 605 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 NIF3L1Q9GZT8 377 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 MMRN2Q9H8L6 949 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 APOBEC3GQ9HC16 384 aaKnown RBP18.24■□□□□ 0.51
PTCD1-202ENST00000419981 ANGPTL2Q9UKU9 493 aa18.24■□□□□ 0.51
PTCD1-202ENST00000419981 PCDH15Q96QU1 1955 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 C4orf47A7E2U8 309 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 NEDD8-MDP1E9PL57 170 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 TBX18O95935 607 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 CD58P19256 250 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 PSMC2P35998 433 aaKnown RBP18.23■□□□□ 0.51
PTCD1-202ENST00000419981 PPP3CAQ08209 521 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 DAB2IPQ5VWQ8 1189 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 GRAMD4Q6IC98 578 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 KRBA2Q6ZNG9 492 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 PIGKQ92643 395 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 XPO6Q96QU8 1125 aaKnown RBP18.23■□□□□ 0.51
PTCD1-202ENST00000419981 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 DNAJC17Q9NVM6 304 aaKnown RBP18.23■□□□□ 0.51
PTCD1-202ENST00000419981 OSER1Q9NX31 292 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 ZDHHC9Q9Y397 364 aa18.23■□□□□ 0.51
PTCD1-202ENST00000419981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 PATE3B3GLJ2 98 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 CACNG3O60359 315 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 GREM1O60565 184 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 CILPO75339 1184 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 HOXB2P14652 356 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 ADAM9Q13443 819 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 PSAPL1Q6NUJ1 521 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 TPGS1Q6ZTW0 290 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 TMEFF1Q8IYR6 380 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 FRMD1Q8N878 549 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 NMUR1Q9HB89 426 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 TMEM8AQ9HCN3 771 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 TMEM9BQ9NQ34 198 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
PTCD1-202ENST00000419981 TP53BP1Q12888 1972 aaPredicted RBP18.21■□□□□ 0.51
PTCD1-202ENST00000419981 A0A1W2PQ27 194 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 A0A1W2PQ64 194 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 A0A1W2PQD8 194 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 A0A1W2PQH9 124 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 PCNX2A6NKB5 2137 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 TRIM24O15164 1050 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms