RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RSPRY1Q96DX4 576 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 CHFRQ96EP1 664 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 ZBTB45Q96K62 511 aaPredicted RBP3.12□□□□□ -1.91
VPS41-206ENST00000418457 SNX27Q96L92 541 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 FAM227BQ96M60 508 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 SORCS2Q96PQ0 1159 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 HIST1H2AAQ96QV6 131 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 DUSP26Q9BV47 211 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 SELENOOQ9BVL4 669 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 VN1R3Q9BXE9 311 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 SLC25A32Q9H2D1 315 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 IKZF4Q9H2S9 585 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 AS3MTQ9HBK9 375 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 ZBTB26Q9HCK0 441 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 RRP7BPQ9NSQ0 103 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 SERTAD4Q9NUC0 356 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 DNAJB11Q9UBS4 358 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 ST3GAL5Q9UNP4 418 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 DAAM1Q9Y4D1 1078 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 DMRT1Q9Y5R6 373 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 EIF3AQ14152 1382 aaKnown RBP3.12□□□□□ -1.91
VPS41-206ENST00000418457 ANKRD30AQ9BXX3 1397 aa3.12□□□□□ -1.91
VPS41-206ENST00000418457 KIAA0556O60303 1618 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 BLMP54132 1417 aaPredicted RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 CAMSAP2Q08AD1 1489 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 CDK13Q14004 1512 aaKnown RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 ABHD14A-ACY1A0A1B0GW23 586 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 FAM234BA2RU67 622 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 AGPSO00116 658 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 QSOX1O00391 747 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PODXLO00592 558 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 MGST3O14880 152 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 HNRNPDLO14979 420 aaKnown RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 KCNQ3O43525 872 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 COQ9O75208 318 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 DLDP09622 509 aaKnown RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 ELFN1P0C7U0 828 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 GABRB3P28472 473 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 NTSR1P30989 418 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 CYP2C18P33260 490 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PPM1AP35813 382 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 CCT8P50990 548 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 TIRAPP58753 221 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 GRM1Q13255 1194 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 STARD3Q14849 445 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PRR16Q569H4 304 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 FAXCQ5TGI0 409 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 C1orf228Q6PIY5 440 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PCSK4Q6UW60 755 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 OLFML1Q6UWY5 402 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 KIAA0408Q6ZU52 694 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PARS2Q7L3T8 475 aaKnown RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 SKAP1Q86WV1 359 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 KRT73Q86Y46 540 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 RAB11FIP4Q86YS3 637 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 GPR150Q8NGU9 434 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 RP9Q8TA86 221 aaKnown RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 CYP2W1Q8TAV3 490 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 ZNF384Q8TF68 577 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 UBE2Q2Q8WVN8 375 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 ZDHHC12Q96GR4 267 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 HAPLN3Q96S86 360 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 GDF15Q99988 308 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 MRIQ9BWK5 157 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.11□□□□□ -1.912e-7■■■■□ 22.5
VPS41-206ENST00000418457 PCDHAC1Q9H158 963 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PLCB1Q9NQ66 1216 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 TM7SF3Q9NS93 570 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 RGL1Q9NZL6 768 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 TMOD4Q9NZQ9 345 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 SLC17A6Q9P2U8 582 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 TAGLN3Q9UI15 199 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 CDC23Q9UJX2 597 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 TLK1Q9UKI8 766 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 DRG1Q9Y295 367 aaKnown RBP3.11□□□□□ -1.91
VPS41-206ENST00000418457 LRCH1Q9Y2L9 728 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 COMMD10Q9Y6G5 202 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 TRPM1Q7Z4N2 1603 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 PARD3Q8TEW0 1356 aa3.11□□□□□ -1.91
VPS41-206ENST00000418457 KIAA0586Q9BVV6 1533 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 ARHGEF5Q12774 1597 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 H0YIZ8 118 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 AP4M1O00189 453 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 EXOC5O00471 708 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 ADAMTS3O15072 1205 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 CCNT2O60583 730 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 PLA2G6O60733 806 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 LMNAP02545 664 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 NPSP0C0P6 89 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 FAM163BP0C2L3 166 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 JUPP14923 745 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 CD19P15391 556 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 ENGP17813 658 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 EGR1P18146 543 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 MST1P26927 711 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 RBL1P28749 1068 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 GKP32189 559 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 HMGA2P52926 109 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 CACNA2D1P54289 1103 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms