RNA–Protein interactions for RNA: ENST00000417433.6

POLR1B-204, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 3,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-204ENST00000417433 CALR3Q96L12 384 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 KRT12Q99456 494 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 NKX2-4Q9H2Z4 354 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 PPANQ9NQ55 473 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 H0Y626 953 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 O00370 1275 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 CCR1P32246 355 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TBX4P57082 545 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 ST8SIA6P61647 398 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 SLC6A3Q01959 620 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 LMNB2Q03252 620 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TAF10Q12962 218 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 NR1H3Q13133 447 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 ZNF268Q14587 947 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TRADDQ15628 312 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TRIP13Q15645 432 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 BOLA3Q53S33 107 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 DNAJC5GQ8N7S2 189 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 LNX1Q8TBB1 728 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 CDK5RAP1Q96SZ6 601 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 GPR62Q9BZJ7 368 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 HAPLN2Q9GZV7 340 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 RAB17Q9H0T7 212 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 POPDC2Q9HBU9 364 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 GPATCH2LQ9NWQ4 482 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TRIM43BA6NCK2 446 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 KIAA0355O15063 1070 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TLR5O60602 858 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TNFRSF8P28908 595 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 GGCXP38435 758 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 AP1B1Q10567 949 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 DDX53Q86TM3 631 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 ZDHHC17Q8IUH5 632 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 SLC4A11Q8NBS3 891 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TSEN2Q8NCE0 465 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 PDZD8Q8NEN9 1154 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 FAM71BQ8TC56 605 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 TRIM43Q96BQ3 446 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 MRRFQ96E11 262 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 SERPINB11Q96P15 392 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 CCDC77Q9BR77 488 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 B3GNT5Q9BYG0 378 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 OLA1Q9NTK5 396 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 HMGXB4Q9UGU5 601 aa8.47□□□□□ -1.05
POLR1B-204ENST00000417433 FARP1Q9Y4F1 1045 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 MRPL42Q9Y6G3 142 aaKnown RBP8.47□□□□□ -1.05
POLR1B-204ENST00000417433 SMIM23A6NLE4 172 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 NEMP1O14524 444 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 SOD2P04179 222 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 ATF2P15336 505 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 PROZP22891 400 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 NRIP1P48552 1158 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 HNRNPH2P55795 449 aaKnown RBP8.46□□□□□ -1.05
POLR1B-204ENST00000417433 FMO1Q01740 532 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 ZNF235Q14590 738 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 UAP1Q16222 522 aaPredicted RBP8.46□□□□□ -1.05
POLR1B-204ENST00000417433 UPP1Q16831 310 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 KCTD19Q17RG1 926 aaPredicted RBP8.46□□□□□ -1.05
POLR1B-204ENST00000417433 HEATR6Q6AI08 1181 aaKnown RBP8.46□□□□□ -1.05
POLR1B-204ENST00000417433 GET4Q7L5D6 327 aaPredicted RBP8.46□□□□□ -1.05
POLR1B-204ENST00000417433 COLGALT1Q8NBJ5 622 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 TTC13Q8NBP0 860 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 KCNK16Q96T55 309 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 LPIN3Q9BQK8 851 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 MED4Q9NPJ6 270 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 ABCC13Q9NSE7 274 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 TAS2R14Q9NYV8 317 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 INTUQ9ULD6 942 aa8.46□□□□□ -1.05
POLR1B-204ENST00000417433 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.46□□□□□ -1.05
POLR1B-204ENST00000417433 F5H423 210 aaPredicted RBP8.46□□□□□ -1.06
POLR1B-204ENST00000417433 ZNF197O14709 1029 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 RNF40O75150 1001 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 RARGP13631 454 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 LRPAP1P30533 357 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 ASPAP45381 313 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 CDK7P50613 346 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 SLC5A3P53794 718 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 CAP1Q01518 475 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 ROR1Q01973 937 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 C1orf220Q5T0J3 134 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 RARS2Q5T160 578 aaKnown RBP8.46□□□□□ -1.06
POLR1B-204ENST00000417433 LCLAT1Q6UWP7 414 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 SLFN11Q7Z7L1 901 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 PGBD3Q8N328 593 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 MAB21L3Q8N8X9 362 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 RUBCNQ92622 972 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 PPP1R10Q96QC0 940 aaKnown RBP8.46□□□□□ -1.06
POLR1B-204ENST00000417433 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.06
POLR1B-204ENST00000417433 GDF3Q9NR23 364 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 HCSTQ9UBK5 93 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 MAD1L1Q9Y6D9 718 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.06
POLR1B-204ENST00000417433 TRAV19A0A0A6YYK7 116 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 TLDC2A0PJX2 215 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 APOL1O14791 398 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 XPO1O14980 1071 aaKnown RBP8.46□□□□□ -1.06
POLR1B-204ENST00000417433 HCRTO43612 131 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 MAP3K6O95382 1288 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 ECEL1O95672 775 aa8.46□□□□□ -1.06
POLR1B-204ENST00000417433 WARSP23381 471 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms