RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CRY1Q16526 586 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 TCERG1LQ5VWI1 586 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 ANKRD40Q6AI12 368 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 GPRIN1Q7Z2K8 1008 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 ZC3H3Q8IXZ2 948 aaKnown RBP26.7■■□□□ 1.86
VEGFA-208ENST00000417285 CCDC33Q8N5R6 958 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 DEC1Q9P2X7 70 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 LSM7Q9UK45 103 aaKnown RBP26.7■■□□□ 1.86
VEGFA-208ENST00000417285 DNAH14Q0VDD8 3507 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 SPTBN2O15020 2390 aa26.7■■□□□ 1.86
VEGFA-208ENST00000417285 CYP26A1O43174 497 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 PPP1R2P41236 205 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 PLA2G4AP47712 749 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 DCAF17Q5H9S7 520 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-208ENST00000417285 PPP1R26Q5T8A7 1209 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-208ENST00000417285 RASSF3Q86WH2 238 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 TMEM25Q86YD3 366 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 ETFBKMTQ8IXQ9 262 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 JAKMIP2Q96AA8 810 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 TMEM176AQ96HP8 235 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 CNOT6LQ96LI5 555 aaKnown RBP26.69■■□□□ 1.86
VEGFA-208ENST00000417285 CDK5RAP1Q96SZ6 601 aaKnown RBP26.69■■□□□ 1.86
VEGFA-208ENST00000417285 DUSP15Q9H1R2 295 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-208ENST00000417285 CISHQ9NSE2 258 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 WDR35Q9P2L0 1181 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 DNMT3LQ9UJW3 386 aa26.69■■□□□ 1.86
VEGFA-208ENST00000417285 CIZ1Q9ULV3 898 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-208ENST00000417285 TBC1D3BA6NDS4 549 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 PSMA7O14818 248 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 IRF1P10914 325 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 RARGP13631 454 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 SLC8A3P57103 927 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 ANO4Q32M45 955 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 ZNF394Q53GI3 561 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 EOGTQ5NDL2 527 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 CCDC186Q7Z3E2 898 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 C12orf40Q86WS4 652 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 ALLCQ8N6M5 410 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 IL17RCQ8NAC3 791 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.68■■□□□ 1.86
VEGFA-208ENST00000417285 COQ4Q9Y3A0 265 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 USP3Q9Y6I4 520 aa26.68■■□□□ 1.86
VEGFA-208ENST00000417285 A0A1W2PQH9 124 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 TULP3O75386 442 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 KLF8O95600 359 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 KIR2DL1P43626 348 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 PMS1P54277 932 aaKnown RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 MESP2Q0VG99 397 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 PLA2G2CQ5R387 149 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 PHTF2Q8N3S3 785 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 C12orf50Q8NA57 414 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 SLC4A11Q8NBS3 891 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 TXNDC5Q8NBS9 432 aaKnown RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 WBP2Q969T9 261 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 DHTKD1Q96HY7 919 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 NMUR1Q9HB89 426 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 POLMQ9NP87 494 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 VPS45Q9NRW7 570 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 OSER1Q9NX31 292 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 CLIC5Q9NZA1 410 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 ARMCX3Q9UH62 379 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-208ENST00000417285 NAGPAQ9UK23 515 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 MAN1B1Q9UKM7 699 aa26.67■■□□□ 1.86
VEGFA-208ENST00000417285 DCDC2BA2VCK2 349 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 TRIM49BA6NDI0 452 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 GREM1O60565 184 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 RALAP11233 206 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 TIE1P35590 1138 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 AASDHQ4L235 1098 aaPredicted RBP26.66■■□□□ 1.86
VEGFA-208ENST00000417285 C10orf120Q5SQS8 335 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 EMC10Q5UCC4 262 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 ANO7Q6IWH7 933 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 TRMT11Q7Z4G4 463 aaKnown RBP26.66■■□□□ 1.86
VEGFA-208ENST00000417285 NAT16Q8N8M0 369 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 DDX1Q92499 740 aaKnown RBP26.66■■□□□ 1.86
VEGFA-208ENST00000417285 TATDN2Q93075 761 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 XPO6Q96QU8 1125 aaKnown RBP26.66■■□□□ 1.86
VEGFA-208ENST00000417285 SPAG17Q6Q759 2223 aa26.66■■□□□ 1.86
VEGFA-208ENST00000417285 LIMK1P53667 647 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 RAD23BP54727 409 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 YWHAEP62258 255 aaKnown RBP26.65■■□□□ 1.86
VEGFA-208ENST00000417285 KDSRQ06136 332 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 ARHGAP17Q68EM7 881 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 ISM2Q6H9L7 571 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 SFTPA1Q8IWL2 248 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 ARHGAP18Q8N392 663 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 ANKRD52Q8NB46 1076 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 METTL14Q9HCE5 456 aaKnown RBP26.65■■□□□ 1.86
VEGFA-208ENST00000417285 ZNF510Q9Y2H8 683 aa26.65■■□□□ 1.86
VEGFA-208ENST00000417285 SGK1O00141 431 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 DCLK1O15075 740 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 GDF9O60383 454 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 CHRM1P11229 460 aaPredicted RBP26.64■■□□□ 1.86
VEGFA-208ENST00000417285 GBP1P32455 592 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 MPLP40238 635 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 COG7P83436 770 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 CBWD6Q4V339 395 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 CBWD3Q5JTY5 395 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 CBWD5Q5RIA9 395 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 TMEM92Q6UXU6 159 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms