RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SYNCQ9H7C4 482 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 GKN1Q9NS71 199 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 SMPD4Q9NXE4 827 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 CYTH4Q9UIA0 394 aa24.22■■□□□ 1.47
SMARCB1-205ENST00000417137 TMEM221A6NGB7 291 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 YJEFN3A6XGL0 299 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 E7ENQ6 273 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 M0R296 226 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 TBX18O95935 607 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 CDH5P33151 784 aaPredicted RBP24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 PBX1P40424 430 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 USP4Q13107 963 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 PDGFRLQ15198 375 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 SLC44A4Q53GD3 710 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 MSANTD4Q8NCY6 345 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 C1orf131Q8NDD1 294 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 IPO4Q8TEX9 1081 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 BAP1Q92560 729 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 SHDQ96IW2 340 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 NUCKS1Q9H1E3 243 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 NOCTQ9UK39 431 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 STRIP2Q9ULQ0 834 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 PATJQ8NI35 1801 aa24.21■■□□□ 1.47
SMARCB1-205ENST00000417137 ZNF638Q14966 1978 aaKnown RBP24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 E5RJQ4 531 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 SLC9A3R1O14745 358 aaPredicted RBP24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 MMEP08473 750 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 SFMBT2Q5VUG0 894 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 TRIM72Q6ZMU5 477 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 BHLHA9Q7RTU4 235 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 ASIC4Q96FT7 647 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 DUS2Q9NX74 493 aaKnown RBP24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 CFAP97Q9P2B7 532 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 SH3BP1Q9Y3L3 701 aa24.2■■□□□ 1.46
SMARCB1-205ENST00000417137 A0A1W2PQJ5 194 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 E2F8A0AVK6 867 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 LTFP02788 710 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 IFNAR2P48551 515 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 COG7P83436 770 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 ERICH1Q86X53 443 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 SIX5Q8N196 739 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 OSCP1Q8WVF1 389 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 CPXM1Q96SM3 734 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 FAM83CQ9BQN1 747 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 KLF16Q9BXK1 252 aaPredicted RBP24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 TTYH3Q9C0H2 523 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 MFSD1Q9H3U5 465 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 ARHGEF3Q9NR81 526 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 TBC1D14Q9P2M4 693 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 NUDT5Q9UKK9 219 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 CA14Q9ULX7 337 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 DENND4CQ5VZ89 1909 aa24.19■■□□□ 1.46
SMARCB1-205ENST00000417137 ITIH6Q6UXX5 1313 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 NUP210Q8TEM1 1887 aaPredicted RBP24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 LRRC53A6NM62 1247 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 PAPSS1O43252 624 aaPredicted RBP24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 GLULP15104 373 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 ZXDBP98169 803 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 PRKCQQ04759 706 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 EFEMP1Q12805 493 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 ASIC2Q16515 512 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 ZDHHC17Q8IUH5 632 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 CLEC4CQ8WTT0 213 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 SLC20A1Q8WUM9 679 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 FAM149B1Q96BN6 582 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 ZFYVE19Q96K21 471 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 AIPL1Q9NZN9 384 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 MARCH2Q9P0N8 246 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 RASAL2Q9UJF2 1139 aa24.18■■□□□ 1.46
SMARCB1-205ENST00000417137 OBSL1O75147 1896 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 MLLT6P55198 1093 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 FMO1Q01740 532 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 MLF2Q15773 248 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 EFHC1Q5JVL4 640 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 BEND5Q7L4P6 421 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 IRF2BP2Q7Z5L9 587 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 BMP8AQ7Z5Y6 402 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 MIB1Q86YT6 1006 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 EDEM1Q92611 657 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 ATP2A3Q93084 1043 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 PBXIP1Q96AQ6 731 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 C18orf8Q96DM3 657 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 ZFRQ96KR1 1074 aaKnown RBP24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 AGPAT1Q99943 283 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 C11orf16Q9NQ32 467 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 LSM7Q9UK45 103 aaKnown RBP24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 CAPN11Q9UMQ6 739 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 ANAPC1Q9H1A4 1944 aa24.17■■□□□ 1.46
SMARCB1-205ENST00000417137 ARNTLO00327 626 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 CAPN9O14815 690 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 GLI1P08151 1106 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 CHRNB2P17787 502 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 KPNA1P52294 538 aaPredicted RBP24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 YWHAZP63104 245 aaKnown RBP24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 ZBED6P86452 979 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 NR1H3Q13133 447 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 RUNX3Q13761 415 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 ITPRIPL2Q3MIP1 535 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 SPECC1LQ69YQ0 1117 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms