RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 LONP2Q86WA8 852 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
ITGB1-204ENST00000417122 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
ITGB1-204ENST00000417122 HINFPQ9BQA5 517 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
ITGB1-204ENST00000417122 NUP62CLQ9H1M0 184 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 SPHK2Q9NRA0 654 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 LSM7Q9UK45 103 aaKnown RBP16.43■□□□□ 0.22
ITGB1-204ENST00000417122 SLC8A2Q9UPR5 921 aa16.43■□□□□ 0.22
ITGB1-204ENST00000417122 VPS13AQ96RL7 3174 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 RNF225M0QZC1 329 aaPredicted RBP16.42■□□□□ 0.22
ITGB1-204ENST00000417122 GREM1O60565 184 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 HOXA6P31267 233 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 HOXC13P31276 330 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 EIF2DP41214 584 aaKnown RBP16.42■□□□□ 0.22
ITGB1-204ENST00000417122 SLC6A11P48066 632 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 LCLAT1Q6UWP7 414 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 UBA3Q8TBC4 463 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 TFAP2BQ92481 460 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 RUBCNQ92622 972 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 PNKPQ96T60 521 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 LRRC4Q9HBW1 653 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
ITGB1-204ENST00000417122 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
ITGB1-204ENST00000417122 K7EQS6 105 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 ZBED1O96006 694 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 SETSIPP0DME0 302 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 CNR2P34972 360 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 YWHAGP61981 247 aaKnown RBP eCLIP16.41■□□□□ 0.22
ITGB1-204ENST00000417122 STILQ15468 1287 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 TPD52L1Q16890 204 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-204ENST00000417122 PKDCCQ504Y2 493 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 BTBD8Q5XKL5 378 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 PM20D1Q6GTS8 502 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 SYT13Q7L8C5 426 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 WDR5BQ86VZ2 330 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 MIB1Q86YT6 1006 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 RBBP8NLQ8NC74 664 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-204ENST00000417122 ACDQ96AP0 544 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 KREMEN1Q96MU8 473 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 ULBP1Q9BZM6 244 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 POLR3BQ9NW08 1133 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-204ENST00000417122 NCDNQ9UBB6 729 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
ITGB1-204ENST00000417122 ZFHX2Q9C0A1 2572 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 HOXC11O43248 304 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 HRO43593 1189 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 KAT7O95251 611 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 APODP05090 189 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 SEC13P55735 322 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 COG7P83436 770 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 KDSRQ06136 332 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 ADIGQ0VDE8 80 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 EFEMP1Q12805 493 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 CNGA2Q16280 664 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 ANO4Q32M45 955 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 DPCR1Q3MIW9 517 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 C2orf27AQ580R0 203 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 PRR23BQ6ZRT6 265 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 TMEM25Q86YD3 366 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 IRF2BP1Q8IU81 584 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 CAMKK1Q8N5S9 505 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 NAT16Q8N8M0 369 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 USP33Q8TEY7 942 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 KCTD13Q8WZ19 329 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 NDRG1Q92597 394 aaKnown RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 UBE2TQ9NPD8 197 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 RAB23Q9ULC3 237 aa16.4■□□□□ 0.22
ITGB1-204ENST00000417122 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITGB1-204ENST00000417122 A0A0A0MRY4 1105 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 CCDC163A0A0D9SF12 145 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 ANTXRLA6NF34 631 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 M0QYV0 167 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 STC2O76061 302 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 CALCAP01258 141 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 GRIA2P42262 883 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
ITGB1-204ENST00000417122 PXNP49023 591 aaPredicted RBP16.39■□□□□ 0.21
ITGB1-204ENST00000417122 ZNF132P52740 706 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 MESP2Q0VG99 397 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 SRSF5Q13243 272 aaKnown RBP16.39■□□□□ 0.21
ITGB1-204ENST00000417122 SIM2Q14190 667 aaPredicted RBP16.39■□□□□ 0.21
ITGB1-204ENST00000417122 DMC1Q14565 340 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 GBP6Q6ZN66 633 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 Q6ZNB5 142 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 TPGS1Q6ZTW0 290 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 RSRC2Q7L4I2 434 aaKnown RBP16.39■□□□□ 0.21
ITGB1-204ENST00000417122 BHLHA9Q7RTU4 235 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 ETFBKMTQ8IXQ9 262 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 SIX6OS1Q8N1H7 587 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 SLC35F5Q8WV83 523 aa16.39■□□□□ 0.21
ITGB1-204ENST00000417122 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms