RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ING5Q8WYH8 240 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 SMG7Q92540 1137 aaKnown RBP8.46□□□□□ -1.06
MDC1-203ENST00000417033 CASP10Q92851 521 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 PPP2R3CQ969Q6 453 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 FAM149B1Q96BN6 582 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 MCEEQ96PE7 176 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 NUP85Q9BW27 656 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 PRKD2Q9BZL6 878 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 GOLPH3Q9H4A6 298 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 SFXN1Q9H9B4 322 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 CNGB3Q9NQW8 809 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 TRMT1Q9NXH9 659 aaKnown RBP8.46□□□□□ -1.06
MDC1-203ENST00000417033 CALCOCO1Q9P1Z2 691 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 CHD7Q9P2D1 2997 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 TMEM59LQ9UK28 342 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 MAFFQ9ULX9 164 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 NAALADL1Q9UQQ1 740 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 SCML2Q9UQR0 700 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 PPP2R2CQ9Y2T4 447 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 MTCL1Q9Y4B5 1905 aaKnown RBP8.46□□□□□ -1.06
MDC1-203ENST00000417033 CHD9Q3L8U1 2897 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 BRWD1Q9NSI6 2320 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 NOTCH4Q99466 2003 aa8.46□□□□□ -1.06
MDC1-203ENST00000417033 A0A1W2PRU2 124 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 C2orf78A6NCI8 922 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 TMEM110-MUSTN1A8MSY1 372 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 H3BQ06 376 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 BUB1O43683 1085 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 DAB1O75553 588 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 FBXO21O94952 628 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 RTN3O95197 1032 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 TBX18O95935 607 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 LTFP02788 710 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 F11P03951 625 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 HNRNPA1P09651 372 aaKnown RBP eCLIP8.45□□□□□ -1.06
MDC1-203ENST00000417033 ZDHHC11BP0C7U3 371 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 CEBPBP17676 345 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 GABRR2P28476 465 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 RFC1P35251 1148 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 ATXN1P54253 815 aaKnown RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 YWHAGP61981 247 aaKnown RBP eCLIP8.45□□□□□ -1.06
MDC1-203ENST00000417033 GPC5P78333 572 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 ZNF268Q14587 947 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 TEAD2Q15562 447 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 PRSS36Q5K4E3 855 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 SH3PXD2AQ5TCZ1 1133 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 BSPRYQ5W0U4 402 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 SLC26A9Q7LBE3 791 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 REXO1L1PQ8IX06 675 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 DEFB106AQ8N104 65 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 SCML4Q8N228 414 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 ST13P5Q8NFI4 369 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 ITFG1Q8TB96 612 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 ADAM32Q8TC27 787 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 HDAC7Q8WUI4 952 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 RXFP2Q8WXD0 754 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 CTNNBL1Q8WYA6 563 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 RFFLQ8WZ73 363 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 TRMT2BQ96GJ1 504 aaKnown RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 MSLNLQ96KJ4 702 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 ZNF512Q96ME7 567 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 SLC22A12Q96S37 553 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 SELENOOQ9BVL4 669 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 S1PR5Q9H228 398 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 CCSER2Q9H7U1 834 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 CYLDQ9NQC7 956 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 AVENQ9NQS1 362 aaPredicted RBP8.45□□□□□ -1.06
MDC1-203ENST00000417033 PRDM6Q9NQX0 595 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 ZDHHC7Q9NXF8 308 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 CTTNBP2NLQ9P2B4 639 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 HYOU1Q9Y4L1 999 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 PAXBP1Q9Y5B6 917 aa8.45□□□□□ -1.06
MDC1-203ENST00000417033 ZNF638Q14966 1978 aaKnown RBP8.44□□□□□ -1.06
MDC1-203ENST00000417033 C2orf16Q68DN1 1984 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 MACROD2A1Z1Q3 448 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 ZNF840PA6NDX5 716 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 C2CD4BA6NLJ0 364 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 SIGLEC16A6NMB1 481 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 PJA2O43164 708 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 CCP110O43303 1012 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 MSI1O43347 362 aaKnown RBP8.44□□□□□ -1.06
MDC1-203ENST00000417033 NRDCO43847 1150 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 XYLBO75191 536 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 IPO7O95373 1038 aaKnown RBP8.44□□□□□ -1.06
MDC1-203ENST00000417033 MOCS3O95396 460 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 PAPLNO95428 1278 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 C1RP00736 705 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 CCDC175P0C221 793 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 MYBL1P10243 752 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 KRT3P12035 628 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 RARGP13631 454 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 TCF4P15884 667 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 EPHA5P54756 1037 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 KRT83P78385 493 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 TAF12Q16514 161 aa8.44□□□□□ -1.06
MDC1-203ENST00000417033 C15orf59Q2T9L4 293 aaPredicted RBP8.44□□□□□ -1.06
MDC1-203ENST00000417033 PABPC1LQ4VXU2 614 aaKnown RBP8.44□□□□□ -1.06
MDC1-203ENST00000417033 TXNDC8Q6A555 127 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms