RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 SKIDA1Q1XH10 827 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC39A12Q504Y0 691 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 BOLA3Q53S33 107 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 UBAP2Q5T6F2 1119 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 FAM171BQ6P995 826 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 BBS12Q6ZW61 710 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 ZC3H18Q86VM9 953 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 IQCKQ8N0W5 287 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 PYROXD2Q8N2H3 581 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 MREGQ8N565 214 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 CCDC33Q8N5R6 958 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 GOLGA6L1Q8N7Z2 621 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 UHMK1Q8TAS1 419 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 EDEM1Q92611 657 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 ART4Q93070 314 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 SNF8Q96H20 258 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 C11orf84Q9BUA3 381 aaPredicted RBP11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 NRDE2Q9H7Z3 1164 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 PCDH18Q9HCL0 1135 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 MTRF1LQ9UGC7 380 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 AP4E1Q9UPM8 1137 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 NEU2Q9Y3R4 380 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 HEY1Q9Y5J3 304 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 MYO16Q9Y6X6 1858 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 HHLA1C9JL84 531 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 M0QYT0 321 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 IVDP26440 423 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ARSEP51690 589 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 GDF10P55107 478 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ARPP19P56211 112 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 DAOAP59103 153 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 TAZQ16635 292 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 P3H1Q32P28 736 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ERMARDQ5T6L9 678 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ALS2CLQ60I27 953 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 PGLYRP2Q96PD5 576 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 CENPHQ9H3R5 247 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 POPDC2Q9HBU9 364 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ABI2Q9NYB9 513 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 TP73O15350 636 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 DAB1O75553 588 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ZBED1O96006 694 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 FYNP06241 537 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 NCAM1P13591 858 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 IL4RP24394 825 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 CHKAP35790 457 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SCNN1AP37088 669 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 GRIK1P39086 918 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 EIF3EP60228 445 aaKnown RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC25A52Q3SY17 297 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ANKRD20A8PQ5CZ79 823 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 IZUMO3Q5VZ72 239 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 KCTD16Q68DU8 428 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SCN4BQ8IWT1 228 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ALLCQ8N6M5 410 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC35B2Q8TB61 432 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 FAM71BQ8TC56 605 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ARL8AQ96BM9 186 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 RNF157Q96PX1 679 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 GPR62Q9BZJ7 368 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 MED4Q9NPJ6 270 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ANAPC5Q9UJX4 755 aa11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 MYO18AQ92614 2054 aaKnown RBP11.12□□□□□ -0.63
SMPD4P1-201ENST00000416717 ENDOD1O94919 500 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 TYMPP19971 482 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 KLRC2P26717 231 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 L1CAMP32004 1257 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 NOS2P35228 1153 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 PMS2P54278 862 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 LMNB2Q03252 620 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 GPS1Q13098 491 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 CEP85LQ5SZL2 805 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 SYDE1Q6ZW31 735 aaPredicted RBP11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 UNC45BQ8IWX7 931 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 CCDC89Q8N998 374 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 NETO2Q8NC67 525 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 PCDH19Q8TAB3 1148 aa11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 KCTD15Q96SI1 283 aaPredicted RBP11.11□□□□□ -0.63
SMPD4P1-201ENST00000416717 LRRC4CQ9HCJ2 640 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms