RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZNF487B1APH4 448 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 I3L4J1 428 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 FCHO1O14526 889 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 SKIP12755 728 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 GPD1P21695 349 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 EDNRBP24530 442 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 GPD2P43304 727 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 DBN1Q16643 649 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 BOLA3Q53S33 107 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 PRPF39Q86UA1 669 aaKnown RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 SLC25A41Q8N5S1 370 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 EMC1Q8N766 993 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 MCUQ8NE86 351 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 SRPK1Q96SB4 655 aaKnown RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 ADPGKQ9BRR6 497 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 TRIM56Q9BRZ2 755 aaKnown RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 FZD8Q9H461 694 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 LRCH1Q9Y2L9 728 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 TTLL3Q9Y4R7 772 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 SPDYE16A6NNV3 312 aaPredicted RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 CYB561D2O14569 222 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 BIRC5O15392 142 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 CILPO75339 1184 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 MICAL2O94851 1124 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 TOP3BO95985 862 aaKnown RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 ZCCHC18P0CG32 403 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 SRGAP2CP0DJJ0 459 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 P4HA1P13674 534 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 DPEP1P16444 411 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 CALRP27797 417 aaKnown RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 TCF7P36402 384 aaPredicted RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 CACNA2D1P54289 1103 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 CDH6P55285 790 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 POLE2P56282 527 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 RAB6CQ53S08 254 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 STXBP5Q5T5C0 1151 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 ATF7IP2Q5U623 682 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 METTL7BQ6UX53 244 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 CYS1Q717R9 158 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 TTC39CQ8N584 583 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 RNF149Q8NC42 400 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 PPFIBP2Q8ND30 876 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 CCDC110Q8TBZ0 833 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 GATA6Q92908 595 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 STMN2Q93045 179 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 C20orf27Q9GZN8 174 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 KLC2Q9H0B6 622 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 RAB6CQ9H0N0 254 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 VCXQ9H320 206 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 RPF1Q9H9Y2 349 aaKnown RBP10.17□□□□□ -0.78
CD44-206ENST00000415148 STK32BQ9NY57 414 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 SIRPGQ9P1W8 387 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 DNAJB4Q9UDY4 337 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 HACL1Q9UJ83 578 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 SORCS3Q9UPU3 1222 aa10.17□□□□□ -0.78
CD44-206ENST00000415148 CCDC195A0A1B0GUA6 201 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 CAPN14A8MX76 684 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 TRIM49D1C9J1S8 452 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 H7C0C1 242 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 UGT1A9O60656 530 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 KRT38O76015 456 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 SORBS2O94875 1100 aaKnown RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 ENO1P06733 434 aaKnown RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 OSBPP22059 807 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 ATP5OP48047 213 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 GCLCP48506 637 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 YWHAZP63104 245 aaKnown RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 AP1B1Q10567 949 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 AP1ARQ63HQ0 302 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 NPNTQ6UXI9 565 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 CYP4V2Q6ZWL3 525 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 PLPPR4Q7Z2D5 763 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 SMC1BQ8NDV3 1235 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 E2F7Q96AV8 911 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 WRNIP1Q96S55 665 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 SIKE1Q9BRV8 207 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 WWP1Q9H0M0 922 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 SDCBP2Q9H190 292 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 C1orf21Q9H246 121 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 UGT1A7Q9HAW7 530 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 UGT1A10Q9HAW8 530 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 UGT1A8Q9HAW9 530 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 PCMTD2Q9NV79 361 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 MARCOQ9UEW3 520 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 ZC3H7BQ9UGR2 993 aaKnown RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 TNFSF13BQ9Y275 285 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 ANKRD33BA6NCL7 494 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 DCAF8L1A6NGE4 600 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 C2CD4BA6NLJ0 364 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 CXorf49A8MYA2 514 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 H3BRJ5 948 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 PRPSAP2O60256 369 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 RFPL1O75677 317 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 EGFRP00533 1210 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 APOEP02649 317 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 KITP10721 976 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 CNTFP26441 200 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms