RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CDR2Q01850 454 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 NR1H3Q13133 447 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 TRIM14Q14142 442 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 ITPRIPL2Q3MIP1 535 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 C1orf131Q8NDD1 294 aaKnown RBP15.35■□□□□ 0.05
LIMS1-206ENST00000414829 OSCP1Q8WVF1 389 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 PPP1R13BQ96KQ4 1090 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 SLC22A12Q96S37 553 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 PLA2G2FQ9BZM2 168 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 CCSER2Q9H7U1 834 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 DUS2Q9NX74 493 aaKnown RBP15.35■□□□□ 0.05
LIMS1-206ENST00000414829 SMPD4Q9NXE4 827 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 CCL26Q9Y258 94 aa15.35■□□□□ 0.05
LIMS1-206ENST00000414829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIMS1-206ENST00000414829 A0A1W2PQJ5 194 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 LTFP02788 710 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 TPM1P09493 284 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 SLC44A4Q53GD3 710 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 BSPRYQ5W0U4 402 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 SCD5Q86SK9 330 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 RALGPS2Q86X27 583 aaPredicted RBP15.34■□□□□ 0.05
LIMS1-206ENST00000414829 PASD1Q8IV76 773 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 TTC16Q8NEE8 873 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 PBXIP1Q96AQ6 731 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 RSPRY1Q96DX4 576 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 NAP1L5Q96NT1 182 aaPredicted RBP15.34■□□□□ 0.05
LIMS1-206ENST00000414829 NELL2Q99435 816 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 DCLK3Q9C098 648 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 RNF38Q9H0F5 515 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 NMUR1Q9HB89 426 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 ACP6Q9NPH0 428 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 ASNSD1Q9NWL6 643 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 MARCH2Q9P0N8 246 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 IFNKQ9P0W0 207 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 CFAP97Q9P2B7 532 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 ZNF510Q9Y2H8 683 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 ITIH6Q6UXX5 1313 aa15.34■□□□□ 0.05
LIMS1-206ENST00000414829 PATJQ8NI35 1801 aa15.33■□□□□ 0.05
LIMS1-206ENST00000414829 BDP1A6H8Y1 2624 aa15.33■□□□□ 0.05
LIMS1-206ENST00000414829 E5RJQ4 531 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 ARNTLO00327 626 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 NCAM2O15394 837 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 ADH1CP00326 375 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 SCNN1AP37088 669 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 MAGEA9P43362 315 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 STARD6P59095 220 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 MTA1Q13330 715 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 NNTQ13423 1086 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 EFHC1Q5JVL4 640 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 MSANTD2Q6P1R3 559 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 ZNF852Q6ZMS4 543 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 NOP9Q86U38 636 aaKnown RBP15.33■□□□□ 0.04
LIMS1-206ENST00000414829 FBXL6Q8N531 539 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 RNF214Q8ND24 703 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 ST13P5Q8NFI4 369 aaPredicted RBP15.33■□□□□ 0.04
LIMS1-206ENST00000414829 DDX1Q92499 740 aaKnown RBP15.33■□□□□ 0.04
LIMS1-206ENST00000414829 PLD4Q96BZ4 506 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 FAM83CQ9BQN1 747 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 OSBPL6Q9BZF3 934 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 SMOC2Q9H3U7 446 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 GKN1Q9NS71 199 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 OSER1Q9NX31 292 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 NOCTQ9UK39 431 aaKnown RBP15.33■□□□□ 0.04
LIMS1-206ENST00000414829 CA14Q9ULX7 337 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 HBS1LQ9Y450 684 aaKnown RBP15.33■□□□□ 0.04
LIMS1-206ENST00000414829 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.04
LIMS1-206ENST00000414829 NUP210Q8TEM1 1887 aaPredicted RBP15.32■□□□□ 0.04
LIMS1-206ENST00000414829 YJEFN3A6XGL0 299 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 E7ENQ6 273 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 CAPN9O14815 690 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 HSF2BPO75031 334 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 CALCAP01258 141 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 CLCN5P51795 746 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 NUBP1P53384 320 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 RUNX3Q13761 415 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 ASIC2Q16515 512 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
LIMS1-206ENST00000414829 SFMBT2Q5VUG0 894 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 TAF3Q5VWG9 929 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 TPRG1Q6ZUI0 275 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 BHLHA9Q7RTU4 235 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 ERICH1Q86X53 443 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 SYN2Q92777 582 aaPredicted RBP15.32■□□□□ 0.04
LIMS1-206ENST00000414829 ZFRQ96KR1 1074 aaKnown RBP15.32■□□□□ 0.04
LIMS1-206ENST00000414829 SERPINB11Q96P15 392 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 CPXM1Q96SM3 734 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 KLF16Q9BXK1 252 aaPredicted RBP15.32■□□□□ 0.04
LIMS1-206ENST00000414829 TBC1D17Q9HA65 648 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 POPDC2Q9HBU9 364 aa15.32■□□□□ 0.04
LIMS1-206ENST00000414829 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
LIMS1-206ENST00000414829 KANSL1LA0AUZ9 987 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 STK25O00506 426 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 LATS1O95835 1130 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 MMEP08473 750 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 NCAM1P13591 858 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 PBX1P40424 430 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 NSFP46459 744 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms