RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 MPLP40238 635 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 PMS1P54277 932 aaKnown RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 MRPS21P82921 87 aaKnown RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 ENPEPQ07075 957 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 CRY1Q16526 586 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 ZNF658Q5TYW1 1059 aaPredicted RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 BTBD8Q5XKL5 378 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 TMEM25Q86YD3 366 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 PHTF2Q8N3S3 785 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 IL17RCQ8NAC3 791 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 FBXL13Q8NEE6 735 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 TATDN2Q93075 761 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 OTUB2Q96DC9 234 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 ZC3H10Q96K80 434 aaKnown RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 HEXIM2Q96MH2 286 aaKnown RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 TSG101Q99816 390 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 KLF16Q9BXK1 252 aaPredicted RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 SPHK2Q9NRA0 654 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 RMND1Q9NWS8 449 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 RAB20Q9NX57 234 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
ACTB-202ENST00000414620 PCDHA5Q9Y5H7 936 aa16.39■□□□□ 0.21
ACTB-202ENST00000414620 HOXC11O43248 304 aaPredicted RBP16.38■□□□□ 0.21
ACTB-202ENST00000414620 TULP3O75386 442 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CHRM1P11229 460 aaPredicted RBP16.38■□□□□ 0.21
ACTB-202ENST00000414620 ATP5C1P36542 298 aaKnown RBP16.38■□□□□ 0.21
ACTB-202ENST00000414620 GRIA2P42262 883 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CREB5Q02930 508 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 BECN1Q14457 450 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 ELF2Q15723 593 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CBWD6Q4V339 395 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CBWD3Q5JTY5 395 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CBWD5Q5RIA9 395 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 TCEAL6Q6IPX3 200 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 TPGS1Q6ZTW0 290 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 RASSF3Q86WH2 238 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 ETFBKMTQ8IXQ9 262 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 TCEAL3Q969E4 200 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CNOT6LQ96LI5 555 aaKnown RBP16.38■□□□□ 0.21
ACTB-202ENST00000414620 CYLDQ9NQC7 956 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 CISHQ9NSE2 258 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 NAGPAQ9UK23 515 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 LSM7Q9UK45 103 aaKnown RBP16.38■□□□□ 0.21
ACTB-202ENST00000414620 CACNA1AO00555 2505 aa16.38■□□□□ 0.21
ACTB-202ENST00000414620 ADAMTS9Q9P2N4 1935 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 TBC1D3BA6NDS4 549 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 RHOBTB1O94844 696 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 ZNF806P0C7X5 589 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 KIR2DL1P43626 348 aaPredicted RBP16.37■□□□□ 0.21
ACTB-202ENST00000414620 KIF11P52732 1056 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 RAD23BP54727 409 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 GOLGA8FQ08AF8 430 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 GOLGA8DPQ0D2H9 430 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 USP39Q53GS9 565 aaKnown RBP16.37■□□□□ 0.21
ACTB-202ENST00000414620 C10orf120Q5SQS8 335 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 C10orf76Q5T2E6 689 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 ANKRD40Q6AI12 368 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 SLC4A11Q8NBS3 891 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 RLN3Q8WXF3 142 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 BHMTQ93088 406 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 SMARCE1Q969G3 411 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 ERLEC1Q96DZ1 483 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 DNAI2Q9GZS0 605 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 PNPLA8Q9NP80 782 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 DNAJC17Q9NVM6 304 aaKnown RBP16.37■□□□□ 0.21
ACTB-202ENST00000414620 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.214e-25■□□□□ 10.3
ACTB-202ENST00000414620 BCCIPQ9P287 314 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTB-202ENST00000414620 DEC1Q9P2X7 70 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 RASAL2Q9UJF2 1139 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 PCDHGA5Q9Y5G8 931 aa16.37■□□□□ 0.21
ACTB-202ENST00000414620 TCRBV21S2A2A0A5A6 115 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 STX10O60499 249 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 GREM1O60565 184 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 ADAM23O75077 832 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 HMBSP08397 361 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 WASP42768 502 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 PPM1JQ5JR12 505 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 EOGTQ5NDL2 527 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 PLA2G2CQ5R387 149 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 PMS2CLQ68D20 193 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 GRAMD4Q6IC98 578 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 HTR3DQ70Z44 454 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 SCD5Q86SK9 330 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 MIB1Q86YT6 1006 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 PGBD3Q8N328 593 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 TERB1Q8NA31 727 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 HMGB4Q8WW32 186 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 GSDMAQ96QA5 445 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 BBS2Q9BXC9 721 aa16.36■□□□□ 0.21
ACTB-202ENST00000414620 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
ACTB-202ENST00000414620 SLC16A3O15427 465 aaKnown RBP16.35■□□□□ 0.21
ACTB-202ENST00000414620 FOXD2O60548 495 aaPredicted RBP16.35■□□□□ 0.21
ACTB-202ENST00000414620 ALDH1A2O94788 518 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 SMC2O95347 1197 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 TYRP14679 529 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms