RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 HSBP1L1C9JCN9 74 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 H0YIN7 160 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CASC3O15234 703 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 BUB1O43683 1085 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PEX11AO75192 247 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PTP4A3O75365 173 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KLHL18O94889 574 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KLHL2O95198 593 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KRT14P02533 472 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LRG1P02750 347 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 RETP07949 1114 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ANXA8P13928 327 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 POLR2EP19388 210 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CYP3A7P24462 503 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LTKP29376 864 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CETN2P41208 172 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 GALK1P51570 392 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CASP5P51878 434 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 INHBCP55103 352 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CARD18P57730 90 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 MYL6P60660 151 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 GMFBP60983 142 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ERVK-21P61565 698 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 VBP1P61758 197 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ASIC1P78348 528 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KCNJ10P78508 379 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 MRPS5P82675 430 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KRT17Q04695 432 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 YWHAHQ04917 246 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PLP2Q04941 152 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 RIPK1Q13546 671 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ACVR2BQ13705 512 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 COTL1Q14019 142 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LASP1Q14847 261 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PCBP2Q15366 365 aaKnown RBP eCLIP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 NR0B2Q15466 257 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 BCL2A1Q16548 175 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 AANATQ16613 207 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ANO4Q32M45 955 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 FLYWCH1Q4VC44 716 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LRRC23Q53EV4 343 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 NBPF12Q5TAG4 269 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ANXA8L1Q5VT79 327 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CDCP2Q5VXM1 449 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 IZUMO3Q5VZ72 239 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 MRM1Q6IN84 353 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 NEPROQ6NW34 567 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PTRH1Q86Y79 214 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 SLC22A9Q8IVM8 553 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 SLITRK4Q8IW52 837 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 DENND6AQ8IWF6 608 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 WDR63Q8IWG1 891 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 HDDC3Q8N4P3 179 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 TSPYL6Q8N831 410 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PDZD8Q8NEN9 1154 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CHST13Q8NET6 341 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LINS1Q8NG48 757 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 FEZF2Q8TBJ5 459 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 GRK7Q8WTQ7 553 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CACTINQ8WUQ7 758 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 BTN2A2Q8WVV5 523 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LINC01599Q8WXQ3 324 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ANKS1AQ92625 1134 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 DDX17Q92841 729 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CUL5Q93034 780 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 HDAC11Q96DB2 347 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ATG4CQ96DT6 458 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 SIGLEC10Q96LC7 697 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 EIF3CQ99613 913 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LLPHQ9BRT6 129 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 SIKE1Q9BRV8 207 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 NTMT1Q9BV86 223 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CDK19Q9BWU1 502 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PINK1Q9BXM7 581 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 EIF2AQ9BY44 585 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 MRPL4Q9BYD3 311 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 API5Q9BZZ5 524 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM2Q9C040 744 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 MTFR1LQ9H019 292 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 RNF38Q9H0F5 515 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 AZI2Q9H6S1 392 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LRRC19Q9H756 370 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ERVMER34-1Q9H9K5 563 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 WDR6Q9NNW5 1121 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 RPRD1BQ9NQG5 326 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 OR6C2Q9NZP2 312 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 USP36Q9P275 1121 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KIF17Q9P2E2 1029 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CACNG4Q9UBN1 327 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 POLKQ9UBT6 870 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CD300AQ9UGN4 299 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ANAPC5Q9UJX4 755 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 KCNH3Q9ULD8 1083 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 ARHGAP26Q9UNA1 814 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 YBX2Q9Y2T7 364 aaKnown RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHGB6Q9Y5F9 930 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CLDN16Q9Y5I7 305 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 TRPV2Q9Y5S1 764 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms