RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CACNG3O60359 315 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 NDUFS2O75306 463 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 DKK1O94907 266 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 GCNT3O95395 438 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 ZNF883P0CG24 379 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 GNSP15586 552 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 GAP43P17677 238 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 MAOBP27338 520 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 YWHAQP27348 245 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 TUBP50607 506 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 WDR45BQ5MNZ6 344 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 HECTD3Q5T447 861 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 SYCP2LQ5T4T6 812 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 SNX30Q5VWJ9 437 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 NUDT18Q6ZVK8 323 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 USP49Q70CQ1 688 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 HS2ST1Q7LGA3 356 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 TMPRSS7Q7RTY8 843 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 GPD1LQ8N335 351 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 ZCCHC9Q8N567 271 aaKnown RBP10.14□□□□□ -0.79
RFFL-203ENST00000413582 GLIS3Q8NEA6 775 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 PDZD8Q8NEN9 1154 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 NOC3LQ8WTT2 800 aaKnown RBP10.14□□□□□ -0.79
RFFL-203ENST00000413582 DNASE2BQ8WZ79 361 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 OVCA2Q8WZ82 227 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 FOXJ1Q92949 421 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 FBXO32Q969P5 355 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 CRELD1Q96HD1 420 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 MMS19Q96T76 1030 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 TRIM9Q9C026 710 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 DPEP3Q9H4B8 488 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 PCIF1Q9H4Z3 704 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 CCSER2Q9H7U1 834 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 IL21RQ9HBE5 538 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 KIAA1522Q9P206 1035 aaPredicted RBP10.14□□□□□ -0.79
RFFL-203ENST00000413582 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 FNDC3AQ9Y2H6 1198 aaKnown RBP10.14□□□□□ -0.79
RFFL-203ENST00000413582 R3HCC1Q9Y3T6 440 aaKnown RBP10.14□□□□□ -0.79
RFFL-203ENST00000413582 NFE2L3Q9Y4A8 694 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 TMEM131Q92545 1883 aa10.14□□□□□ -0.79
RFFL-203ENST00000413582 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 A0A087WV48 116 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 A0A1B0GTW7 788 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 EIF4E1BA6NMX2 242 aaKnown RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 MEI4A8MW99 385 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 GREM1O60565 184 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 CILPO75339 1184 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 TACC1O75410 805 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 RTN3O95197 1032 aaPredicted RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 BMP15O95972 392 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 TNNC2P02585 160 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 ZDHHC11BP0C7U3 371 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 IRF1P10914 325 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 PTPN1P18031 435 aaKnown RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 CD6P30203 668 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 BNC1Q01954 994 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 ALCAMQ13740 583 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 KIAA1324Q6UXG2 1013 aaKnown RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 MARCH9Q86YJ5 346 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 CBWD2Q8IUF1 395 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 SYCP3Q8IZU3 236 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 NUP93Q8N1F7 819 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 B3GALNT2Q8NCR0 500 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 SCAMP5Q8TAC9 235 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 EPSTI1Q96J88 318 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 B3GNT5Q9BYG0 378 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 SNX25Q9H3E2 840 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 WSB2Q9NYS7 404 aaPredicted RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 MARK1Q9P0L2 795 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 GMIPQ9P107 970 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 USP36Q9P275 1121 aaKnown RBP10.13□□□□□ -0.79
RFFL-203ENST00000413582 NAV2Q8IVL1 2488 aa10.13□□□□□ -0.79
RFFL-203ENST00000413582 TP53BP1Q12888 1972 aaPredicted RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 FAM92AA1XBS5 289 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 NEDD8-MDP1E9PL57 170 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 H3BQV1 296 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 GFRA2O00451 464 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 KIAA0391O15091 583 aaKnown RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 CER1O95813 267 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 ATXN1LP0C7T5 689 aaKnown RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 NCAM1P13591 858 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 TYRP14679 529 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 GNL1P36915 607 aaPredicted RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 SLC5A3P53794 718 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 CYP4F3Q08477 520 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 DUOXA2Q1HG44 320 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 FUT11Q495W5 492 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 LARP1BQ659C4 914 aaKnown RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 METTL3Q86U44 580 aaKnown RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 FAM35AQ86V20 835 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 WDR49Q8IV35 697 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 SCUBE3Q8IX30 993 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 OR6B3Q8NGW1 331 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 SETD7Q8WTS6 366 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms