RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SLC8A2Q9UPR5 921 aa16.5■□□□□ 0.23
MCF2L-211ENST00000413354 EP300Q09472 2414 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 K7ESF4 209 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 TBX18O95935 607 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 ZBED1O96006 694 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 ERCC5P28715 1186 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 CNR2P34972 360 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 OPRD1P41143 372 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 MTIF2P46199 727 aaKnown RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 TKTL1P51854 596 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 LY6G5CQ5SRR4 150 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 BTBD8Q5XKL5 378 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 RHBDF2Q6PJF5 856 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 HTR3DQ70Z44 454 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 RRAGAQ7L523 313 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 SCD5Q86SK9 330 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 LONP2Q86WA8 852 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 BBS7Q8IWZ6 715 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 SIX6OS1Q8N1H7 587 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 SECISBP2LQ93073 1101 aaKnown RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 THAP9Q9H5L6 903 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 FBRSL1Q9HCM7 1045 aaKnown RBP16.49■□□□□ 0.23
MCF2L-211ENST00000413354 LMBRD1Q9NUN5 540 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 RAB23Q9ULC3 237 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 STRIP2Q9ULQ0 834 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 ZNF510Q9Y2H8 683 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 GVINP1Q7Z2Y8 2422 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 MYO15AQ9UKN7 3530 aa16.49■□□□□ 0.23
MCF2L-211ENST00000413354 USP34Q70CQ2 3546 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 GTPBP10A4D1E9 387 aaKnown RBP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 M0QYV0 167 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 HOXC11O43248 304 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 APODP05090 189 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 ZNF132P52740 706 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 YWHAGP61981 247 aaKnown RBP eCLIP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 COG7P83436 770 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 CNGA2Q16280 664 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 CT47A1Q5JQC4 288 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 SMYD5Q6GMV2 418 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 PM20D1Q6GTS8 502 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 RPLP0P6Q8NHW5 317 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 KCTD13Q8WZ19 329 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 RUBCNQ92622 972 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 KAT5Q92993 513 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 PNKPQ96T60 521 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 ULBP1Q9BZM6 244 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 SPHK2Q9NRA0 654 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 OLA1Q9NTK5 396 aaKnown RBP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 RASAL2Q9UJF2 1139 aa16.48■□□□□ 0.23
MCF2L-211ENST00000413354 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
MCF2L-211ENST00000413354 CCDC163A0A0D9SF12 145 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 KRT5P13647 590 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-211ENST00000413354 MFAP3P55082 362 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 ADIGQ0VDE8 80 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 PKDCCQ504Y2 493 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 PKN3Q6P5Z2 889 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 TRIM65Q6PJ69 517 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 NUDT18Q6ZVK8 323 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 WDR5BQ86VZ2 330 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 MIB1Q86YT6 1006 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 SCML4Q8N228 414 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 CAMKK1Q8N5S9 505 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 SUMF1Q8NBK3 374 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 UBA3Q8TBC4 463 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 TFAP2BQ92481 460 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 KREMEN1Q96MU8 473 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 DCLK3Q9C098 648 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 UBE2TQ9NPD8 197 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-211ENST00000413354 CNGB3Q9NQW8 809 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 ARHGEF4Q9NR80 690 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 NUDT5Q9UKK9 219 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 CNTN6Q9UQ52 1028 aa16.47■□□□□ 0.23
MCF2L-211ENST00000413354 TULP2O00295 520 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 MDM4O15151 490 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 KAT7O95251 611 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
MCF2L-211ENST00000413354 GRIA2P42262 883 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 FNTBP49356 437 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 MRPS21P82921 87 aaKnown RBP16.46■□□□□ 0.23
MCF2L-211ENST00000413354 EFEMP1Q12805 493 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 MEA1Q16626 185 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 MAN2A1Q16706 1144 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 EXOC3L4Q17RC7 722 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 ANO4Q32M45 955 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 HSF5Q4G112 596 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-211ENST00000413354 HEATR6Q6AI08 1181 aaKnown RBP16.46■□□□□ 0.23
MCF2L-211ENST00000413354 Q6ZNB5 142 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 SYT13Q7L8C5 426 aa16.46■□□□□ 0.23
MCF2L-211ENST00000413354 EZH1Q92800 747 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms