RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 DAAM2Q86T65 1068 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 NR2C2APQ86WQ0 139 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 MMP21Q8N119 569 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 C3orf20Q8ND61 904 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM156AQ8NDB6 213 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 MPLKIPQ8TAP9 179 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 MORC4Q8TE76 937 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 TMEM255BQ8WV15 326 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 CDK5RAP3Q96JB5 506 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM167AQ96KS9 214 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 CHMP4AQ9BY43 222 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 B3GNT5Q9BYG0 378 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZDHHC8Q9ULC8 765 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 GABRQQ9UN88 632 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 RIPOR2Q9Y4F9 1068 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 TCF20Q9UGU0 1960 aaKnown RBP2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 DHX57Q6P158 1386 aaKnown RBP2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 CUX2O14529 1486 aa2.96□□□□□ -1.93
HMGB3P2-201ENST00000411913 NCAPD3P42695 1498 aa2.96□□□□□ -1.93
HMGB3P2-201ENST00000411913 CEP162Q5TB80 1403 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 GOLIM4O00461 696 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 DCLK1O15075 740 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 PMM2O15305 246 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 CNOT3O75175 753 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 EIF3JO75822 258 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 NGFRP08138 427 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 IFIT2P09913 472 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 FTH1P19P0C7X4 201 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 CTSAP10619 480 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 PIM1P11309 404 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 HTR3AP46098 478 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 NEK3P51956 506 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 NKX6-1P78426 367 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 SATB1Q01826 763 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 NOGQ13253 232 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 MORC3Q14149 939 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 KIAA0753Q2KHM9 967 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 AWAT1Q58HT5 328 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 TMTC4Q5T4D3 741 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 RNF220Q5VTB9 566 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 CAPRIN2Q6IMN6 1127 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 TMEM65Q6PI78 240 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 TMPRSS12Q86WS5 348 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 SMC5Q8IY18 1101 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 C16orf71Q8IYS4 520 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 SIRT6Q8N6T7 355 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 B4GALNT2Q8NHY0 566 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 PNISRQ8TF01 805 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 OSCP1Q8WVF1 389 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 SOCS4Q8WXH5 440 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 ZNF479Q96JC4 524 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 NLRP4Q96MN2 994 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 STRBPQ96SI9 672 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 MPHOSPH6Q99547 160 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 MEIS3Q99687 375 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 MYH16Q9H6N6 1097 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 ASIC5Q9NY37 505 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 ERRFI1Q9UJM3 462 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 AMFRQ9UKV5 643 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 NDRG4Q9ULP0 352 aaKnown RBP2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 FAM50BQ9Y247 325 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 PCDHA3Q9Y5H8 950 aa2.96□□□□□ -1.94
HMGB3P2-201ENST00000411913 EIF4G1Q04637 1599 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 LOC102724159A0A0B4J2E5 919 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 IGLV5-39A0A0G2JS06 123 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 LRRC14BA6NHZ5 514 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 CES2O00748 559 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 FRS3O43559 492 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 SYF2O95926 243 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 LDHAP00338 332 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 MT-CO3P00414 261 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 SLC5A1P13866 664 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 PDE6CP51160 858 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 COPB1P53618 953 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 AK2P54819 239 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 MTX1Q13505 466 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 FGL2Q14314 439 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 POLD3Q15054 466 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 PWP2Q15269 919 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 CNN3Q15417 329 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 CYP1B1Q16678 543 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 AMOTQ4VCS5 1084 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 CCDC157Q569K6 752 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 MANEAQ5SRI9 462 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 GORABQ5T7V8 394 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 DPY19L3Q6ZPD9 716 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 MAEAQ7L5Y9 396 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 CAND1Q86VP6 1230 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 FAM90A1Q86YD7 464 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 LIX1LQ8IVB5 337 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 SFTPA1Q8IWL2 248 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 PCSK9Q8NBP7 692 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 PLBD2Q8NHP8 589 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 LRTOMTQ8WZ04 291 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 MTFMTQ96DP5 389 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 FAM84BQ96KN1 310 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 MOGAT1Q96PD6 335 aa2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 ELAC2Q9BQ52 826 aaKnown RBP2.95□□□□□ -1.94
HMGB3P2-201ENST00000411913 POLR3GLQ9BT43 218 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms