RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 SMC2O95347 1197 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 MPLP40238 635 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 NUCB2P80303 420 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 CRY1Q16526 586 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 SMARCE1Q969G3 411 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 GSDMAQ96QA5 445 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 DUSP15Q9H1R2 295 aaPredicted RBP23.53■■□□□ 1.36
MSH6-202ENST00000411819 NMUR1Q9HB89 426 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 ZDHHC4Q9NPG8 344 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 CYLDQ9NQC7 956 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 CISHQ9NSE2 258 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 NAGPAQ9UK23 515 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 NUDT5Q9UKK9 219 aa23.53■■□□□ 1.36
MSH6-202ENST00000411819 SPTBN2O15020 2390 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 TBC1D3BA6NDS4 549 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 MDM4O15151 490 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 HOXC11O43248 304 aaPredicted RBP23.52■■□□□ 1.36
MSH6-202ENST00000411819 RHOBTB1O94844 696 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 RARGP13631 454 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 USP39Q53GS9 565 aaKnown RBP23.52■■□□□ 1.36
MSH6-202ENST00000411819 C10orf120Q5SQS8 335 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 EMC10Q5UCC4 262 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 TMEM25Q86YD3 366 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 TTC39CQ8N584 583 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 IL17RCQ8NAC3 791 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 MDGA1Q8NFP4 955 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 CNOT6LQ96LI5 555 aaKnown RBP23.52■■□□□ 1.36
MSH6-202ENST00000411819 ARID3AQ99856 593 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 KLF16Q9BXK1 252 aaPredicted RBP23.52■■□□□ 1.36
MSH6-202ENST00000411819 DUSP16Q9BY84 665 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 SMOC1Q9H4F8 434 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 DEC1Q9P2X7 70 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 CIZ1Q9ULV3 898 aaPredicted RBP23.52■■□□□ 1.36
MSH6-202ENST00000411819 PCDHGA5Q9Y5G8 931 aa23.52■■□□□ 1.36
MSH6-202ENST00000411819 NCOR2Q9Y618 2525 aa23.52■■□□□ 1.35
MSH6-202ENST00000411819 SGK1O00141 431 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 SLC16A3O15427 465 aaKnown RBP23.51■■□□□ 1.35
MSH6-202ENST00000411819 TULP3O75386 442 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 ALDH1A2O94788 518 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 ZNF806P0C7X5 589 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 HSF5Q4G112 596 aaPredicted RBP23.51■■□□□ 1.35
MSH6-202ENST00000411819 PREPLQ4J6C6 727 aaPredicted RBP23.51■■□□□ 1.35
MSH6-202ENST00000411819 EOGTQ5NDL2 527 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 TMEM92Q6UXU6 159 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 HTR3DQ70Z44 454 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 RASSF3Q86WH2 238 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 ETFBKMTQ8IXQ9 262 aa23.51■■□□□ 1.35
MSH6-202ENST00000411819 DUSP9Q99956 384 aaKnown RBP23.51■■□□□ 1.35
MSH6-202ENST00000411819 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.51■■□□□ 1.35
MSH6-202ENST00000411819 HOOK1Q9UJC3 728 aaKnown RBP23.51■■□□□ 1.35
MSH6-202ENST00000411819 TRIM49BA6NDI0 452 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 NEDD8-MDP1E9PL57 170 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 KCNA4P22459 653 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 TNFRSF4P43489 277 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 KIR2DL1P43626 348 aaPredicted RBP23.5■■□□□ 1.35
MSH6-202ENST00000411819 KIF11P52732 1056 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 PMS1P54277 932 aaKnown RBP23.5■■□□□ 1.35
MSH6-202ENST00000411819 FKBP3Q00688 224 aaKnown RBP23.5■■□□□ 1.35
MSH6-202ENST00000411819 CREB5Q02930 508 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 CBWD6Q4V339 395 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 COBLL1Q53SF7 1204 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 CBWD3Q5JTY5 395 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 CBWD5Q5RIA9 395 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 C10orf76Q5T2E6 689 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 ANKRD40Q6AI12 368 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 TPGS1Q6ZTW0 290 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 CCDC186Q7Z3E2 898 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 PHTF2Q8N3S3 785 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 ENGASEQ8NFI3 743 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 TMEM176AQ96HP8 235 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 FAXDC2Q96IV6 333 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 POLMQ9NP87 494 aaPredicted RBP23.5■■□□□ 1.35
MSH6-202ENST00000411819 DNAJC17Q9NVM6 304 aaKnown RBP23.5■■□□□ 1.35
MSH6-202ENST00000411819 BCCIPQ9P287 314 aaKnown RBP eCLIP23.5■■□□□ 1.35
MSH6-202ENST00000411819 DNMT3LQ9UJW3 386 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 THADAQ6YHU6 1953 aa23.5■■□□□ 1.35
MSH6-202ENST00000411819 MYO18AQ92614 2054 aaKnown RBP23.5■■□□□ 1.35
MSH6-202ENST00000411819 HNRNPLP14866 589 aaKnown RBP eCLIP23.49■■□□□ 1.35
MSH6-202ENST00000411819 PSEN1P49768 467 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 IL31Q6EBC2 164 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 NUDT18Q6ZVK8 323 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 TADA2BQ86TJ2 420 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 C11orf74Q86VG3 221 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 MIB1Q86YT6 1006 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 ZNF513Q8N8E2 541 aaPredicted RBP23.49■■□□□ 1.35
MSH6-202ENST00000411819 TERB1Q8NA31 727 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 SLC4A11Q8NBS3 891 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 TATDN2Q93075 761 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 BBS2Q9BXC9 721 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 VPS45Q9NRW7 570 aa23.49■■□□□ 1.35
MSH6-202ENST00000411819 ABCA7Q8IZY2 2146 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 A0A0A0MRY4 1105 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 GREM1O60565 184 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 RALAP11233 206 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 RAD23BP54727 409 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 MCCD1P59942 119 aaPredicted RBP23.48■■□□□ 1.35
MSH6-202ENST00000411819 LRRC63Q05C16 580 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 STIM1Q13586 685 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 PLA2G2CQ5R387 149 aa23.48■■□□□ 1.35
MSH6-202ENST00000411819 GRAMD4Q6IC98 578 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms