RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ANXA9O76027 345 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 PNPLA4P41247 253 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 CMTM5Q96DZ9 223 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 RAD21L1Q9H4I0 556 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 AVENQ9NQS1 362 aaPredicted RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 NR2E3Q9Y5X4 410 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 TRIM43BA6NCK2 446 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 BOP1Q14137 746 aaKnown RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 RBM23Q86U06 439 aaKnown RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 MTMR12Q9C0I1 747 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 SPATA2Q9UM82 520 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 STON1Q9Y6Q2 735 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 MYMKA6NI61 221 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM25AB3EWG3 89 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM25CB3EWG5 89 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM25GB3EWG6 89 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 NDUFB10O96000 172 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 CSF1RP07333 972 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 TPGS1Q6ZTW0 290 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 OSCP1Q8WVF1 389 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 RFFLQ8WZ73 363 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 SUPT7LO94864 414 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 PSMA4P25789 261 aaKnown RBP11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 GSSP48637 474 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 EPHA7Q15375 998 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 TKFCQ3LXA3 575 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 PALB2Q86YC2 1186 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 WDR35Q9P2L0 1181 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC25A12O75746 678 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 POLR2EP19388 210 aaKnown RBP11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 BIKQ13323 160 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 DHX34Q14147 1143 aaKnown RBP11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 OLFM3Q96PB7 478 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 LRRIQ1Q96JM4 1722 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 VAC14Q08AM6 782 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 RGS18Q9NS28 235 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 NUDT2P50583 147 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 CDK5RAP1Q96SZ6 601 aaKnown RBP11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 PSMC3IPQ9P2W1 217 aaPredicted RBP11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 PRKAB1Q9Y478 270 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 JCADQ9P266 1359 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 ITGADQ13349 1161 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 NAPEPLDQ6IQ20 393 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 PTPRHQ9HD43 1115 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
PRPF40A-202ENST00000410080 NR5A2O00482 541 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 FMO5P49326 533 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 FAXCQ5TGI0 409 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 MRNIPQ6NTE8 343 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 CYP4Z2PQ8N1L4 340 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 DSEQ9UL01 958 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 A0A087WZ62 844 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 GRID2IPA4D2P6 1211 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 XYLBO75191 536 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 HLA-DRAP01903 254 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 NDUFV1P49821 464 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ARSJQ5FYB0 599 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 MICU2Q8IYU8 434 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 C19orf60Q96EN9 201 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 RBM7Q9Y580 266 aaKnown RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 CRTAMO95727 393 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 PEX5P50542 639 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 TBC1D25Q3MII6 688 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 SHC4Q6S5L8 630 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ATG9AQ7Z3C6 839 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 CBWD2Q8IUF1 395 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 RBM15Q96T37 977 aaKnown RBP eCLIP11.56□□□□□ -0.563e-8■■■■■ 27.6
PRPF40A-202ENST00000410080 ACOX2Q99424 681 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 PAK5Q9P286 719 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 TPST1O60507 370 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF618Q5T7W0 954 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 SERHL2Q9H4I8 314 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 SERHLQ9NQF3 203 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 CHORDC1Q9UHD1 332 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 EPC2Q52LR7 807 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 SLFN11Q7Z7L1 901 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 CCNT2O60583 730 aaKnown RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ATP6V1B2P21281 511 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ATP2C1P98194 919 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 TRAF2Q12933 501 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 CBFBQ13951 182 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ZDHHC6Q9H6R6 413 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 IARS2Q9NSE4 1012 aaKnown RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 AAR2Q9Y312 384 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms