RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 MANSC1Q9H8J5 431 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 FAM32AQ9Y421 112 aaKnown RBP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 FRMD3A2A2Y4 597 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 ZBTB39O15060 712 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 EIF3HO15372 352 aaKnown RBP eCLIP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 SYNCRIPO60506 623 aaKnown RBP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 H2AFYO75367 372 aaKnown RBP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 MAFO75444 373 aaPredicted RBP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 SERPINF2P08697 491 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 CNTFP26441 200 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 PTPN7P35236 360 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 HSD17B3P37058 310 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 GTF2BQ00403 316 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 DENND1BQ6P3S1 775 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 C16orf89Q6UX73 402 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 SH3RF1Q7Z6J0 888 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 EDEM1Q92611 657 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 NT5MQ9NPB1 228 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 RBM22Q9NW64 420 aaKnown RBP eCLIP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 GID8Q9NWU2 228 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 DCDC2Q9UHG0 476 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 ITM2BQ9Y287 266 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 A0A087X0B3 334 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 ANKRD63C9JTQ0 380 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 MYO1CO00159 1063 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 GLRA2P23416 452 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 ZNF473Q8WTR7 871 aaKnown RBP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 HAS1Q92839 578 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 CEP19Q96LK0 163 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 UROC1Q96N76 676 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 KCTD10Q9H3F6 313 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 PCDH9Q9HC56 1237 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 WARS2Q9UGM6 360 aaKnown RBP9.38□□□□□ -0.91
PBRM1-208ENST00000410007 NR2E3Q9Y5X4 410 aa9.38□□□□□ -0.91
PBRM1-208ENST00000410007 MAGEB16A2A368 324 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 TRIM66O15016 1216 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 CHI3L2Q15782 390 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 WDR93Q6P2C0 686 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 COPS5Q92905 334 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 FAR2Q96K12 515 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 TMEM121Q9BTD3 319 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 FICDQ9BVA6 458 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 DCLK3Q9C098 648 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SYTL2Q9HCH5 934 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ADGRA2Q96PE1 1338 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 E2F8A0AVK6 867 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ANKRD65E5RJM6 399 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 CDH2P19022 906 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 MRPS6P82932 125 aaKnown RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ZNF557Q8N988 423 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 YIPF2Q9BWQ6 316 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 FTHL17Q9BXU8 183 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 PCDHAC2Q9Y5I4 1007 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 FKTNO75072 461 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 NR2C2P49116 596 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 CDH8P55286 799 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 KCNK10P57789 538 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 EIF2B5Q13144 721 aaKnown RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 PREPLQ4J6C6 727 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 PABPC1LQ4VXU2 614 aaKnown RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 MYO1HQ8N1T3 1032 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 WNK4Q96J92 1243 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ILKAPQ9H0C8 392 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 AURKCQ9UQB9 309 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ALDH1A2O94788 518 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 MZF1P28698 734 aaPredicted RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 STARD3Q14849 445 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ILDR2Q71H61 639 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 DEFB106AQ8N104 65 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 COLGALT1Q8NBJ5 622 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SGF29Q96ES7 293 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 TMA16Q96EY4 203 aaKnown RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 SRPK1Q96SB4 655 aaKnown RBP9.37□□□□□ -0.91
PBRM1-208ENST00000410007 ATXN3LQ9H3M9 355 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 PRDM16Q9HAZ2 1276 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 TRHDEQ9UKU6 1024 aa9.37□□□□□ -0.91
PBRM1-208ENST00000410007 PRR23AA6NEV1 266 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 PHF20L1A8MW92 1017 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 EVPLLA8MZ36 301 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 IGF2BP3O00425 579 aaKnown RBP eCLIP9.36□□□□□ -0.91
PBRM1-208ENST00000410007 FGRP09769 529 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 SCNN1BP51168 640 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 RTP1P59025 263 aa9.36□□□□□ -0.91
PBRM1-208ENST00000410007 NLRP9Q7RTR0 991 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms