RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ZNF425Q6IV72 752 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 COL23A1Q86Y22 540 aaPredicted RBP5.25□□□□□ -1.57
CLK1-203ENST00000409769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLK1-203ENST00000409769 KRT78Q8N1N4 520 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 NGDNQ8NEJ9 315 aaKnown RBP5.25□□□□□ -1.57
CLK1-203ENST00000409769 MSLNLQ96KJ4 702 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 SLC46A1Q96NT5 459 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 PTDSS2Q9BVG9 487 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 ZNF518BQ9C0D4 1074 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 LRRC27Q9C0I9 530 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 BTBD1Q9H0C5 482 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 BHMT2Q9H2M3 363 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 PEAK1Q9H792 1746 aa5.25□□□□□ -1.57
CLK1-203ENST00000409769 USP19O94966 1318 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 NPHP3Q7Z494 1330 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 NFAT5O94916 1531 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 COL16A1Q07092 1604 aaPredicted RBP5.24□□□□□ -1.57
CLK1-203ENST00000409769 CFAP69A5D8W1 941 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 VPS4BO75351 444 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 HMGB1P09429 215 aaKnown RBP5.24□□□□□ -1.57
CLK1-203ENST00000409769 CD6P30203 668 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 LRPAP1P30533 357 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 SLC7A1P30825 629 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 ZNF134P52741 427 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 UCP3P55916 312 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 GRM1Q13255 1194 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 CTBP1Q13363 440 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 RAB32Q13637 225 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 CNGA2Q16280 664 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 TSHZ1Q6ZSZ6 1077 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 CCDC149Q6ZUS6 474 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 C9orf106Q8NAJ2 232 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 MAML1Q92585 1016 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 FAM136AQ96C01 138 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 PADI4Q9UM07 663 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 SHOC2Q9UQ13 582 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 PNPLA6Q8IY17 1366 aa5.24□□□□□ -1.57
CLK1-203ENST00000409769 TNS3Q68CZ2 1445 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 COL22A1Q8NFW1 1626 aaPredicted RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 TRIM43BA6NCK2 446 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 MBD3L4A6NDZ8 208 aaPredicted RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 MBD3L3A6NE82 208 aaPredicted RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 TBC1D4O60343 1298 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 MGEA5O60502 916 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 ELFN1P0C7U0 828 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 SSBP2P81877 361 aaPredicted RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 SLC13A2Q13183 592 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 KIAA0753Q2KHM9 967 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 RBM20Q5T481 1227 aaKnown RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 ICE2Q659A1 982 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 TMEM108Q6UXF1 575 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 KRT28Q7Z3Y7 464 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 AMIGO2Q86SJ2 522 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 DTX2Q86UW9 622 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 MORC1Q86VD1 984 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 MICU3Q86XE3 530 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 DNAJC5GQ8N7S2 189 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 PCSK9Q8NBP7 692 aaKnown RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 TRIM43Q96BQ3 446 aaPredicted RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 A1CFQ9NQ94 594 aaKnown RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 XPNPEP3Q9NQH7 507 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 EHD3Q9NZN3 535 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 INSRP06213 1382 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 CDK12Q9NYV4 1490 aaPredicted RBP5.23□□□□□ -1.57
CLK1-203ENST00000409769 COL18A1P39060 1754 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 KAT6AQ92794 2004 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 PHLPP1O60346 1717 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 RGPD1P0DJD0 1748 aa5.23□□□□□ -1.57
CLK1-203ENST00000409769 RGPD5Q99666 1765 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 MYO1CO00159 1063 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 FOXN3O00409 490 aaPredicted RBP5.22□□□□□ -1.57
CLK1-203ENST00000409769 CHRM3P20309 590 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 PEX2P28328 305 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 PTGER1P34995 402 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 PXNP49023 591 aaPredicted RBP5.22□□□□□ -1.57
CLK1-203ENST00000409769 SUMO3P55854 103 aaPredicted RBP5.22□□□□□ -1.57
CLK1-203ENST00000409769 FMO1Q01740 532 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 HSP90AB2PQ58FF8 381 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 TEDDM1Q5T9Z0 273 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 LAYNQ6UX15 382 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 RASAL3Q86YV0 1011 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 ZNF366Q8N895 744 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 PNISRQ8TF01 805 aaKnown RBP5.22□□□□□ -1.57
CLK1-203ENST00000409769 COG3Q96JB2 828 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 NUP62CLQ9H1M0 184 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 STK32BQ9NY57 414 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 POLKQ9UBT6 870 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 ADAM21Q9UKJ8 722 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 ADGRA2Q96PE1 1338 aa5.22□□□□□ -1.57
CLK1-203ENST00000409769 ARHGEF10O15013 1369 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 KIF24Q5T7B8 1368 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 TOM1O60784 492 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 NXPH3O95157 252 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 TRIM27P14373 513 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 CERS1P27544 350 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 MTHFSP49914 203 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 LILRA4P59901 499 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 SATB1Q01826 763 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms