RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 LGI2Q8N0V4 545 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SH2D3CQ8N5H7 860 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 HAUS2Q9NVX0 235 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GIPC1O14908 333 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 KCNA4P22459 653 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SLC11A2P49281 568 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 RAD23BP54727 409 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 CES3Q6UWW8 571 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 RILPQ96NA2 401 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 HAPLN2Q9GZV7 340 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 CHST7Q9NS84 486 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 HOMER3Q9NSC5 361 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 BFARQ9NZS9 450 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 MYH11P35749 1972 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 GOLGA8KD6RF30 607 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 F5H5T6 163 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GOLGA8TH3BQL2 631 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SETSIPP0DME0 302 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 CA4P22748 312 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 OR1E1P30953 314 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SERPINB6P35237 376 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GPR15P49685 360 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 ARL4CP56559 192 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 TAS2R40P59535 323 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 GNGT1P63211 74 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 ZNF177Q13360 481 aaPredicted RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 CRELD2Q6UXH1 353 aaPredicted RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 BLOC1S5Q8TDH9 187 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.514e-7■■□□□ 11.6
SNX13-202ENST00000409604 TBCBQ99426 244 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 CXCL16Q9H2A7 254 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 TLE6Q9H808 572 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 MSRAQ9UJ68 235 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 SPAG7O75391 227 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX13-202ENST00000409604 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 LRRC43Q8N309 656 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 TM6SF2Q9BZW4 377 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
SNX13-202ENST00000409604 TLR8Q9NR97 1041 aaKnown RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 XPO7Q9UIA9 1087 aaKnown RBP11.84□□□□□ -0.51
SNX13-202ENST00000409604 PAPPAQ13219 1627 aa11.83□□□□□ -0.51
SNX13-202ENST00000409604 PPP1R12AO14974 1030 aaPredicted RBP11.83□□□□□ -0.52
SNX13-202ENST00000409604 TLR5O60602 858 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 MT-ND3P03897 115 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 RPLP2P05387 115 aaKnown RBP11.83□□□□□ -0.52
SNX13-202ENST00000409604 ITGA8P53708 1063 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 HGSNATQ68CP4 663 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 ANKRD52Q8NB46 1076 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 SLC4A11Q8NBS3 891 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 OR6K2Q8NGY2 324 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 WNT8BQ93098 351 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 A0A0U1RQF3 1178 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 CCDC151A5D8V7 595 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 PDE2AO00408 941 aaPredicted RBP11.83□□□□□ -0.52
SNX13-202ENST00000409604 CTGFP29279 349 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 SMAD3P84022 425 aaKnown RBP11.83□□□□□ -0.52
SNX13-202ENST00000409604 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
SNX13-202ENST00000409604 MEA1Q16626 185 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 SCARA3Q6AZY7 606 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 APTXQ7Z2E3 356 aaKnown RBP11.83□□□□□ -0.52
SNX13-202ENST00000409604 BBOF1Q8ND07 529 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 RMDN2Q96LZ7 410 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 PWWP2AQ96N64 755 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 O00370 1275 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 CILPO75339 1184 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 CCR1P32246 355 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 LONRF1Q17RB8 773 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 RFWD3Q6PCD5 774 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 SPOCD1Q6ZMY3 1216 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 SERINC5Q86VE9 423 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 CCT6BQ92526 530 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 ATP2A3Q93084 1043 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 TTC17Q96AE7 1141 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 FGD4Q96M96 766 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 PNKPQ96T60 521 aa11.83□□□□□ -0.52
SNX13-202ENST00000409604 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
SNX13-202ENST00000409604 RNF40O75150 1001 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 PAEPP09466 180 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 PIRTP0C851 137 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 RARGP13631 454 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ST8SIA6P61647 398 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 NNTQ13423 1086 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 HIF1AQ16665 826 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ARHGAP15Q53QZ3 475 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 TFDP3Q5H9I0 405 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 AGMOQ6ZNB7 445 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 FAM47EQ6ZV65 393 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 NPAS4Q8IUM7 802 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 OR12D3Q9UGF7 316 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms