RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM225BP0DP42 221 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 CYP2A6P11509 494 aaPredicted RBP4.88□□□□□ -1.63
PMS1-203ENST00000409593 APEHP13798 732 aaKnown RBP4.88□□□□□ -1.63
PMS1-203ENST00000409593 ARHGAP25P42331 645 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 GPS1Q13098 491 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 HLTFQ14527 1009 aaKnown RBP eCLIP4.88□□□□□ -1.631e-6■■■■□ 24.4
PMS1-203ENST00000409593 LONRF1Q17RB8 773 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 MTX3Q5HYI7 312 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 MIS18BP1Q6P0N0 1132 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 CATSPERGQ6ZRH7 1159 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 BEND5Q7L4P6 421 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 RNF152Q8N8N0 203 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 ADAMTS18Q8TE60 1221 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 PARD3BQ8TEW8 1205 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 FAM227BQ96M60 508 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 SELENOOQ9BVL4 669 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 NAA15Q9BXJ9 866 aaKnown RBP4.88□□□□□ -1.63
PMS1-203ENST00000409593 QTRT1Q9BXR0 403 aaKnown RBP4.88□□□□□ -1.63
PMS1-203ENST00000409593 MAGEB5Q9BZ81 275 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 SEMA4CQ9C0C4 833 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 USP29Q9HBJ7 922 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 GEMIN8Q9NWZ8 242 aaKnown RBP4.88□□□□□ -1.63
PMS1-203ENST00000409593 WDR91A4D1P6 747 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 CLCA1A8K7I4 914 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 CA12O43570 354 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 PRC1O43663 620 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 CAND2O75155 1236 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 TUBB4AP04350 444 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 MYL4P12829 197 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 KELP23276 732 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 ADRA1DP25100 572 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 LMO1P25800 156 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 COPAP53621 1224 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 TXNL4AP83876 142 aaKnown RBP4.87□□□□□ -1.63
PMS1-203ENST00000409593 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 KCNB1Q14721 858 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 SUPT20HL1Q3ZLR7 823 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 FAXCQ5TGI0 409 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 ZNF626Q68DY1 528 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 SLC18B1Q6NT16 456 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 DCDC5Q6ZRR9 648 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 KRT28Q7Z3Y7 464 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 NEK8Q86SG6 692 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 TXLNBQ8N3L3 684 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 C8orf58Q8NAV2 365 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 MBD3L2Q8NHZ7 208 aaPredicted RBP4.87□□□□□ -1.63
PMS1-203ENST00000409593 ZDHHC12Q96GR4 267 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 EFHD1Q9BUP0 239 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 MYO1AQ9UBC5 1043 aa4.87□□□□□ -1.63
PMS1-203ENST00000409593 A0A1W2PPC4 97 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 BTBD19C9JJ37 291 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 CCNT2O60583 730 aaKnown RBP4.86□□□□□ -1.63
PMS1-203ENST00000409593 COQ9O75208 318 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 RNF8O76064 485 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 HTR7P34969 479 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 ZNF268Q14587 947 aaPredicted RBP4.86□□□□□ -1.63
PMS1-203ENST00000409593 CLCA4Q14CN2 919 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 CC2D1BQ5T0F9 858 aaKnown RBP4.86□□□□□ -1.63
PMS1-203ENST00000409593 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 STARD7Q9NQZ5 370 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 KLHL13Q9P2N7 655 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 RNF7Q9UBF6 113 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.86□□□□□ -1.63
PMS1-203ENST00000409593 AREL1O15033 823 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 ADAMTS3O15072 1205 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 NCK2O43639 380 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 WDR47O94967 919 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 NDST3O95803 873 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 MYL1P05976 194 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 IDEP14735 1019 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 TNFSF4P23510 183 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 TBX4P57082 545 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 LARS2Q15031 903 aaKnown RBP4.86□□□□□ -1.63
PMS1-203ENST00000409593 SLC2A7Q6PXP3 512 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 LINC01465Q8N7H1 131 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 ZBTB26Q9HCK0 441 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 WDR17Q8IZU2 1322 aa4.86□□□□□ -1.63
PMS1-203ENST00000409593 COL15A1P39059 1388 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 ZNF804BA4D1E1 1349 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 KCNU1A8MYU2 1149 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 ARP10275 920 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 HARSP12081 509 aaKnown RBP4.85□□□□□ -1.63
PMS1-203ENST00000409593 MST1P26927 711 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 CFHR3Q02985 330 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 CCDC15Q0P6D6 951 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 ARL13BQ3SXY8 428 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 C4orf46Q504U0 113 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 FAM209BQ5JX69 171 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 IL31Q6EBC2 164 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 ABLIM2Q6H8Q1 611 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 GRHL2Q6ISB3 625 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 HIBCHQ6NVY1 386 aaPredicted RBP4.85□□□□□ -1.63
PMS1-203ENST00000409593 VSTM1Q6UX27 236 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 CCDC28AQ8IWP9 274 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 GALNT16Q8N428 558 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 C12orf76Q8N812 135 aaPredicted RBP4.85□□□□□ -1.63
PMS1-203ENST00000409593 FAM71DQ8N9W8 422 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 ABHD5Q8WTS1 349 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms