RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 KCNJ1P48048 391 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 IFRD2Q12894 506 aaPredicted RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SNX1Q13596 522 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 DHX34Q14147 1143 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 BTG3Q14201 252 aaPredicted RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TRADDQ15628 312 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 CA9Q16790 459 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 ZC3H12AQ5D1E8 599 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SDHAF4Q5VUM1 108 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 CCNI2Q6ZMN8 369 aaPredicted RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 ANKS3Q6ZW76 656 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 MAATS1Q7Z4T9 603 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SCML4Q8N228 414 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 ATAD1Q8NBU5 361 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 STKLD1Q8NE28 680 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TEKT4Q8WW24 435 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 IRGQQ8WZA9 623 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 BADQ92934 168 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 NT5C3BQ969T7 300 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 NCAPGQ9BPX3 1015 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 STAP1Q9ULZ2 295 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TRIM66O15016 1216 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 ERLIN1O75477 346 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 ENDOD1O94919 500 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 TJP3O95049 919 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 MAGEA11P43364 429 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 CDH6P55285 790 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 MMRN1Q13201 1228 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 DPYSL3Q14195 570 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 DDR2Q16832 855 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 BOLA3Q53S33 107 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 BEND6Q5SZJ8 279 aaPredicted RBP14.67□□□□□ -0.06
GPNMB-203ENST00000409458 VSTM1Q6UX27 236 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 RNF19BQ6ZMZ0 732 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 JAMLQ86YT9 394 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 IFT20Q8IY31 132 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 SLC39A11Q8N1S5 342 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 CCDC185Q8N715 623 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 COLGALT1Q8NBJ5 622 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 HNRNPLLQ8WVV9 542 aaKnown RBP14.67□□□□□ -0.06
GPNMB-203ENST00000409458 ZNF558Q96NG5 402 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 CRISPLD1Q9H336 500 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 MTRRQ9UBK8 725 aa14.67□□□□□ -0.06
GPNMB-203ENST00000409458 SYNJ2BP-COX16A0A087WUM0 186 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 FAM187AA6NFU0 413 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 ZBBXA8MT70 800 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 M0QYT0 321 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 CAPN9O14815 690 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 MDM4O15151 490 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 ADAM12O43184 909 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 NCAM1P13591 858 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 LAG3P18627 525 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 RDXP35241 583 aaKnown RBP14.66□□□□□ -0.06
GPNMB-203ENST00000409458 CARSP49589 748 aaKnown RBP14.66□□□□□ -0.06
GPNMB-203ENST00000409458 DYNLT1P63172 113 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 FPGSQ05932 587 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 GPR17Q13304 367 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.06
GPNMB-203ENST00000409458 KRT81Q14533 505 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 USP41Q3LFD5 358 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 FAM131BQ86XD5 332 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 RFX6Q8HWS3 928 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 CCDC105Q8IYK2 499 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 SLC7A14Q8TBB6 771 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 ADAM32Q8TC27 787 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 RIN2Q8WYP3 895 aaPredicted RBP14.66□□□□□ -0.06
GPNMB-203ENST00000409458 EDEM1Q92611 657 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 HAUS1Q96CS2 278 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 C8orf48Q96LL4 319 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 RUNDC3BQ96NL0 473 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 YME1L1Q96TA2 773 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 CALN1Q9BXU9 219 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 ARFGAP3Q9NP61 516 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 COX16Q9P0S2 106 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 PRKAG2Q9UGJ0 569 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 EFR3BQ9Y2G0 817 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 CDY1Q9Y6F8 540 aa14.66□□□□□ -0.06
GPNMB-203ENST00000409458 SOAT2O75908 522 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 EPHB4P54760 987 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 PSMD5Q16401 504 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 CCNG2Q16589 344 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 ERMARDQ5T6L9 678 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 C7orf61Q8IZ16 206 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 FBXO22Q8NEZ5 403 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 IFT81Q8WYA0 676 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 PIK3R5Q8WYR1 880 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 HERC2P3Q9BVR0 1158 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 OXCT2Q9BYC2 517 aaPredicted RBP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 PIGVQ9NUD9 493 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 AP4E1Q9UPM8 1137 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 C2CD2LO14523 706 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 LIASO43766 372 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 CST8O60676 142 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 FGBP02675 491 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 SOD2P04179 222 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 RPL17P18621 184 aaKnown RBP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 ECHS1P30084 290 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms