RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CXorf57Q6NSI4 855 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 MAGEB6Q8N7X4 407 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 MZB1Q8WU39 189 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 C17orf50Q8WW18 174 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 OPTNQ96CV9 577 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 HSPBAP1Q96EW2 488 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 CHMP6Q96FZ7 201 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 NAF1Q96HR8 494 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 IWS1Q96ST2 819 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 KRT23Q9C075 422 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 USP44Q9H0E7 712 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 KCTD10Q9H3F6 313 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 MTG2Q9H4K7 406 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 TMBIM4Q9HC24 238 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 PPANQ9NQ55 473 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 JADE2Q9NQC1 790 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK1-202ENST00000409403 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ATXN10Q9UBB4 475 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 ZFP69BQ9UJL9 534 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
CLK1-202ENST00000409403 SNX12Q9UMY4 172 aa5.82□□□□□ -1.48
CLK1-202ENST00000409403 LRRC37A2A6NM11 1700 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 ASTN2O75129 1339 aaPredicted RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 SEMA7AO75326 666 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 TMCC1O94876 653 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 PCDH8O95206 1070 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 LMNAP02545 664 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 GYPCP04921 128 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 MYL1P05976 194 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 CLTAP09496 248 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 NQO1P15559 274 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 ZFXP17010 805 aaPredicted RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 VCAM1P19320 739 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 IGFBP6P24592 240 aaPredicted RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 HSPA9P38646 679 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 GLRBP48167 497 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 LGALS4P56470 323 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 KIF5AQ12840 1032 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 MLC1Q15049 377 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 SPDYCQ5MJ68 293 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 ANKRD20A2Q5SQ80 823 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 ANKRD20A1Q5TYW2 823 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 ANKRD20A3Q5VUR7 823 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 DPP8Q6V1X1 898 aaPredicted RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 ZNF365Q70YC5 407 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 IGDCC3Q8IVU1 814 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 GSPT2Q8IYD1 628 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 KIRREL3Q8IZU9 778 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 SH2D3CQ8N5H7 860 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 SPATA4Q8NEY3 305 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 AGAP11Q8TF27 550 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 ATXN2LQ8WWM7 1075 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 AUTS2Q8WXX7 1259 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 RBM17Q96I25 401 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 CAPZA3Q96KX2 299 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 FAM227BQ96M60 508 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 TCEANC2Q96MN5 208 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 WRNIP1Q96S55 665 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 SEC62Q99442 399 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 MPHOSPH6Q99547 160 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 SYT3Q9BQG1 590 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 SLF1Q9BQI6 1058 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 PYM1Q9BRP8 204 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 PITHD1Q9GZP4 211 aaPredicted RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 LARSQ9P2J5 1176 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 THEGQ9P2T0 379 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 LIMA1Q9UHB6 759 aaKnown RBP5.81□□□□□ -1.48
CLK1-202ENST00000409403 DPP7Q9UHL4 492 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 SCOCQ9UIL1 159 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 DAAM1Q9Y4D1 1078 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 CFAP47Q6ZTR5 3102 aa5.81□□□□□ -1.48
CLK1-202ENST00000409403 LTBP2Q14767 1821 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 WDR19Q8NEZ3 1342 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 A0A0D9SFI3 127 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 GRID2IPA4D2P6 1211 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 LRRC10BA6NIK2 292 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 ZNF233A6NK53 670 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CPLX1O14810 134 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 PRPF3O43395 683 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 CEP104O60308 925 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 MAFO75444 373 aaPredicted RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 E2F6O75461 281 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CTDNEP1O95476 244 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 IL33O95760 270 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 IL18BPO95998 194 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CCDC166P0CW27 439 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 ACADSP16219 412 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 ATP6V1C1P21283 382 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 KRT9P35527 623 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 SKIV2L2P42285 1042 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 SARSP49591 514 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 SEC24CP53992 1094 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 EIF3BP55884 814 aaKnown RBP5.8□□□□□ -1.48
CLK1-202ENST00000409403 TBX4P57082 545 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 IL13RA1P78552 427 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 C2orf54Q08AI8 447 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 NFATC3Q12968 1075 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 CRHR2Q13324 411 aa5.8□□□□□ -1.48
CLK1-202ENST00000409403 ADAM9Q13443 819 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms