RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 BOLA3Q53S33 107 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ZC3H12AQ5D1E8 599 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PPP6R3Q5H9R7 873 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 MDH1BQ5I0G3 518 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM182AQ5T1J6 154 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CCSAPQ6IQ19 270 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RHBDF2Q6PJF5 856 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 NPNTQ6UXI9 565 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 BBS12Q6ZW61 710 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PIGZQ86VD9 579 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 FUKQ8N0W3 1084 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ALLCQ8N6M5 410 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TOP6BLQ8N6T0 577 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 C1orf216Q8TAB5 229 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 STK32AQ8WU08 396 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 COL26A1Q96A83 441 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM149B1Q96BN6 582 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ADAM2Q99965 735 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 DDX23Q9BUQ8 820 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CAPS2Q9BXY5 557 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CDC42EP4Q9H3Q1 356 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 AAASQ9NRG9 546 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 DDX43Q9NXZ2 648 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 FKBPLQ9UIM3 349 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 DRG1Q9Y295 367 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 GIT1Q9Y2X7 761 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 HTTP42858 3142 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 DCDC2CA8MYV0 355 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 BEST1O76090 585 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 B3GAT3O94766 335 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 MAP3K6O95382 1288 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 NUDT17P0C025 328 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 RBP3P10745 1247 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 PECAM1P16284 738 aaPredicted RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 DESP17661 470 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 WARSP23381 471 aaKnown RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 HOXD10P28358 340 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 ACTN2P35609 894 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC19A1P41440 591 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 ACADSBP45954 432 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 ACLYP53396 1101 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 EIF3EP60228 445 aaKnown RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 MAGOHP61326 146 aaKnown RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 CAV1Q03135 178 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 ADIGQ0VDE8 80 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 LPIN1Q14693 890 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SPDYCQ5MJ68 293 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 KIAA0319Q5VV43 1072 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 DRICH1Q6PGQ1 229 aaPredicted RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 LIMS2Q7Z4I7 341 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 ZC3H18Q86VM9 953 aaKnown RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 RNF135Q8IUD6 432 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 ZDHHC17Q8IUH5 632 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 MAP7D3Q8IWC1 876 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 BBOF1Q8ND07 529 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 C3orf58Q8NDZ4 430 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC35B2Q8TB61 432 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SPATA18Q8TC71 538 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 RSAD2Q8WXG1 361 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 C9orf72Q96LT7 481 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 GLT1D1Q96MS3 346 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SPSB2Q99619 263 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 DUSP16Q9BY84 665 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 MAGEB5Q9BZ81 275 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 RSAD1Q9HA92 442 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 DDX20Q9UHI6 824 aaKnown RBP4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 EFR3BQ9Y2G0 817 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SCN10AQ9Y5Y9 1956 aa4.15□□□□□ -1.74
LRRTM4-201ENST00000409088 SYNJ2BP-COX16A0A087WUM0 186 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 MYBPHLA2RUH7 354 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 DNALI1O14645 258 aaPredicted RBP4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 XPO1O14980 1071 aaKnown RBP4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 ITGAVP06756 1048 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 NPR3P17342 541 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 NDUFV1P49821 464 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 IRAK1P51617 712 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 NRLP54845 237 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 GDF10P55107 478 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 HDAC4P56524 1084 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 MAP3K7CLP57077 242 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 NKX3-2P78367 333 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 GUCY1A3Q02108 690 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 DPYSL3Q14195 570 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 CA9Q16790 459 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 HP1BP3Q5SSJ5 553 aaPredicted RBP4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 C1orf228Q6PIY5 440 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 PAQR9Q6ZVX9 377 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 CYP4V2Q6ZWL3 525 aaPredicted RBP4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 TRMT10CQ7L0Y3 403 aaKnown RBP4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 SLC26A9Q7LBE3 791 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 RPAINQ86UA6 219 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 HOOK3Q86VS8 718 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 UNC45BQ8IWX7 931 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 DEFB106AQ8N104 65 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 HASPINQ8TF76 798 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 P3H4Q92791 437 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 NKD2Q969F2 451 aaPredicted RBP4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 HSFY1Q96LI6 401 aa4.15□□□□□ -1.75
LRRTM4-201ENST00000409088 RBM15Q96T37 977 aaKnown RBP eCLIP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms