RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 HACD1B0YJ81 288 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 FAM155AB1AL88 458 aaPredicted RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 WDR64B1ANS9 1081 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CENPBD1B2RD01 187 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TRIM49D1C9J1S8 452 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CFAP99D6REC4 459 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PIK3R2O00459 728 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MEIS1O00470 390 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TRIM38O00635 465 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MEIS2O14770 477 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 GIPC1O14908 333 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 VILLO15195 856 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 NKRFO15226 690 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SLC22A1O15245 554 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PSMD3O43242 534 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TIMM44O43615 452 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 EXTL3O43909 919 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 KDM1AO60341 852 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SNAP91O60641 907 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 DNAJA2O60884 412 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 RNASEH1O60930 286 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SIN3BO75182 1162 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 DEAF1O75398 565 aaPredicted RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 KATNA1O75449 491 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SUPT3HO75486 399 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 DGAT1O75907 488 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 HSPA4LO95757 839 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 APOEP02649 317 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PROCP04070 461 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MYL3P08590 195 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CD48P09326 243 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TMEM191BP0C7N4 346 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TRIM49P0CI25 452 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TRIM49CP0CI26 452 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 RALBP11234 206 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CETPP11597 493 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CYP2C9P11712 490 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CDK4P11802 303 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 COL6A2P12110 1019 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 BMP3P12645 472 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 COX4I1P13073 169 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 P4HA1P13674 534 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PCSK2P16519 638 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TPSB2P20231 275 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 BGNP21810 368 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CDH3P22223 829 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 IL10P22301 178 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MMP8P22894 467 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 AMPD1P23109 780 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 GLRA2P23416 452 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 GCAP28676 217 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TKTP29401 623 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 NMT1P30419 496 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 HSPA1LP34931 641 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 RPL22P35268 128 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SPRP35270 261 aaPredicted RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CDKN2BP42772 138 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MAGEA6P43360 314 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 ALDH3B2P48448 385 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PSMD8P48556 350 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SLC1A6P48664 564 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 KRT6CP48668 564 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MARCKSL1P49006 195 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 NR2C2P49116 596 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 HARS2P49590 506 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 RBM5P52756 815 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 ALDH18A1P54886 795 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TMBIM6P55061 237 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 AQP4P55087 323 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SIK1P57059 783 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 EIF3EP60228 445 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 ABCE1P61221 599 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 NAA20P61599 178 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PSMC5P62195 406 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 FKBP1AP62942 108 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 NOMO3P69849 1222 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CLDN10P78369 228 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 BASP1P80723 227 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MPP1Q00013 466 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 KRT76Q01546 638 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CACNB1Q02641 598 aaPredicted RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 RELAQ04206 551 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PPP3CAQ08209 521 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 ADCY1Q08828 1119 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 BST1Q10588 318 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SF3A3Q12874 501 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 OVGP1Q12889 678 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 MPP3Q13368 585 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TOP3AQ13472 1001 aaPredicted RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 SNAPC2Q13487 334 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 CUL2Q13617 745 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 APOFQ13790 326 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TTLL12Q14166 644 aaPredicted RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 TFDP1Q14186 410 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 DPYSL3Q14195 570 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 FRG1Q14331 258 aaKnown RBP2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 INPP5AQ14642 412 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 ZNF846Q147U1 533 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 PSMD6Q15008 389 aa2.93□□□□□ -1.94
SNORD88.1-201ENST00000408684 STILQ15468 1287 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms