RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 AMFRQ9UKV5 643 aa21.41■■□□□ 1.02
CHKB-201ENST00000406938 USTQ9Y2C2 406 aa21.41■■□□□ 1.02
CHKB-201ENST00000406938 HCFC2Q9Y5Z7 792 aa21.41■■□□□ 1.02
CHKB-201ENST00000406938 GREB1Q4ZG55 1949 aa21.41■■□□□ 1.02
CHKB-201ENST00000406938 CTAGE9A4FU28 777 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 ATP1A1P05023 1023 aaKnown RBP21.4■■□□□ 1.02
CHKB-201ENST00000406938 TFE3P19532 575 aaPredicted RBP21.4■■□□□ 1.02
CHKB-201ENST00000406938 NOS2P35228 1153 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 PTPN9P43378 593 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 NRIP1P48552 1158 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 CDO1Q16878 200 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 PPM1LQ5SGD2 360 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 SH3PXD2AQ5TCZ1 1133 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 BTBD8Q5XKL5 378 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 ARHGAP18Q8N392 663 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 TRMT2BQ96GJ1 504 aaKnown RBP21.4■■□□□ 1.02
CHKB-201ENST00000406938 MYRFLQ96LU7 910 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 ADAM33Q9BZ11 813 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 OSER1Q9NX31 292 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 STAP1Q9ULZ2 295 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 MYO7AQ13402 2215 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 LRCH4O75427 683 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 PITX1P78337 314 aaPredicted RBP21.4■■□□□ 1.02
CHKB-201ENST00000406938 DUSP6Q16828 381 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 BEND5Q7L4P6 421 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 DNAJB7Q7Z6W7 309 aaPredicted RBP21.4■■□□□ 1.02
CHKB-201ENST00000406938 ITIH5Q86UX2 942 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 ARFGAP1Q8N6T3 406 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 FAM172AQ8WUF8 416 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 TLR10Q9BXR5 811 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 TLR8Q9NR97 1041 aaKnown RBP21.4■■□□□ 1.02
CHKB-201ENST00000406938 ABCC13Q9NSE7 274 aa21.4■■□□□ 1.02
CHKB-201ENST00000406938 ZMYND10O75800 440 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 DESP17661 470 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 SULT1E1P49888 294 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 DNA2P51530 1060 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 ACAP1Q15027 740 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 SLC25A52Q3SY17 297 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 RAB6CQ53S08 254 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 DNTTIP2Q5QJE6 756 aaKnown RBP21.39■■□□□ 1.01
CHKB-201ENST00000406938 OTUD1Q5VV17 481 aaPredicted RBP21.39■■□□□ 1.01
CHKB-201ENST00000406938 RTL10Q7L3V2 364 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 CD101Q93033 1021 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 NT5C3BQ969T7 300 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 TBCBQ99426 244 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 NPY6RQ99463 290 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 RAB6CQ9H0N0 254 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 RRAGDQ9NQL2 400 aaPredicted RBP21.39■■□□□ 1.01
CHKB-201ENST00000406938 ASB3Q9Y575 518 aa21.39■■□□□ 1.01
CHKB-201ENST00000406938 CCL16O15467 120 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 RFPL2O75678 378 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 RNF8O76064 485 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 ZDHHC11BP0C7U3 371 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 TCF4P15884 667 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 SSR1P43307 286 aaKnown RBP21.38■■□□□ 1.01
CHKB-201ENST00000406938 PSEN1P49768 467 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 RBM10P98175 930 aaKnown RBP21.38■■□□□ 1.01
CHKB-201ENST00000406938 CC2D1AQ6P1N0 951 aaPredicted RBP21.38■■□□□ 1.01
CHKB-201ENST00000406938 PDZD8Q8NEN9 1154 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 OVCA2Q8WZ82 227 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 HES6Q96HZ4 224 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 ZNF512Q96ME7 567 aaPredicted RBP21.38■■□□□ 1.01
CHKB-201ENST00000406938 ZNF334Q9HCZ1 680 aaPredicted RBP21.38■■□□□ 1.01
CHKB-201ENST00000406938 CALCOCO1Q9P1Z2 691 aa21.38■■□□□ 1.01
CHKB-201ENST00000406938 TAS2R40P59535 323 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 RPS6KA1Q15418 735 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 ELMOD1Q8N336 334 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 KIF18AQ8NI77 898 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 ADAM32Q8TC27 787 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 HDAC7Q8WUI4 952 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 CENPIQ92674 756 aaPredicted RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 KRT35Q92764 455 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 PPP2R3CQ969Q6 453 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 TTYH1Q9H313 450 aaPredicted RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 CLIC5Q9NZA1 410 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 UXTQ9UBK9 157 aaPredicted RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 DPP7Q9UHL4 492 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 ZNF638Q14966 1978 aaKnown RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 TMEM265A0A087WTH1 108 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 MIF4GDA9UHW6 222 aaKnown RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 TADA3O75528 432 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 HOXA9P31269 272 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 CTNNA1P35221 906 aaKnown RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 GTF2F1P35269 517 aaKnown RBP eCLIP21.37■■□□□ 1.01
CHKB-201ENST00000406938 PCK1P35558 622 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 MARCKSL1P49006 195 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 HDAC4P56524 1084 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 RSRC2Q7L4I2 434 aaKnown RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 STRADAQ7RTN6 431 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 TAC4Q86UU9 113 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 DQX1Q8TE96 717 aaKnown RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 PSMB7Q99436 277 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 CDCA3Q99618 268 aaPredicted RBP21.37■■□□□ 1.01
CHKB-201ENST00000406938 PRDM12Q9H4Q4 367 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.37■■□□□ 1.01
CHKB-201ENST00000406938 RRN3Q9NYV6 651 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 NUDT5Q9UKK9 219 aa21.37■■□□□ 1.01
CHKB-201ENST00000406938 M0QYT0 321 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 DDX3YO15523 660 aaKnown RBP21.36■■□□□ 1.01
CHKB-201ENST00000406938 RARGP13631 454 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms