RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CTXN3Q4LDR2 81 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZNF569Q5MCW4 686 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 DGAT2L7PQ6IED9 249 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 CLEC9AQ6UXN8 241 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 LRRC55Q6ZSA7 311 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 RRAGAQ7L523 313 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 CPOQ8IVL8 374 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 B3GALNT2Q8NCR0 500 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 HMGB4Q8WW32 186 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 ATG4AQ8WYN0 398 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 EDAQ92838 391 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 RILPL2Q969X0 211 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 RSPRY1Q96DX4 576 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 ALOXE3Q9BYJ1 711 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 VPS16Q9H269 839 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 GLOD4Q9HC38 313 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 IRAK4Q9NWZ3 460 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 GGA3Q9NZ52 723 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 NKX1-2Q9UD57 310 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 SSX2IPQ9Y2D8 614 aa5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 UBE2J1Q9Y385 318 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM90A18PA6NE21 464 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM90A16PA6NEW6 464 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 SAC3D1A6NKF1 404 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM90A9PA6NNJ1 464 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM90A5PA8MXJ8 464 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 KIAA0355O15063 1070 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 DHHO43323 396 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZNF623O75123 536 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 TAF5LO75529 589 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 CDKL5O76039 1030 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 WDR47O94967 919 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 CNPP09543 421 aaKnown RBP5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM90A15PP0C7V4 464 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM90A14PP0C7W9 464 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 LIFRP42702 1097 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 SCNN1GP51170 649 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 VAV2P52735 878 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 NAP1L1P55209 391 aaKnown RBP5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 ITIH3Q06033 890 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 SF3A3Q12874 501 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 ACOX1Q15067 660 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 DLGAP5Q15398 846 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 GEN1Q17RS7 908 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 RABL3Q5HYI8 236 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 VPS53Q5VIR6 699 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 B3GNTL1Q67FW5 361 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 MZT2BQ6NZ67 158 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 BBS12Q6ZW61 710 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 NME8Q8N427 588 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 HTRA1Q92743 480 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 VPS50Q96JG6 964 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 TWNKQ96RR1 684 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 PAAF1Q9BRP4 392 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 C17orf80Q9BSJ5 609 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 ACTRT3Q9BYD9 372 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 RXFP3Q9NSD7 469 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 RIMKLBQ9ULI2 386 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 DRG1Q9Y295 367 aaKnown RBP5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 SLC27A6Q9Y2P4 619 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 SNX14Q9Y5W7 946 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 TOP2BQ02880 1626 aa5.36□□□□□ -1.55
HMGB3P18-201ENST00000406327 MARCH11A6NNE9 402 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 A8MVJ9 347 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 B4E171 279 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 ADM5C9JUS6 153 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 SLC16A3O15427 465 aaKnown RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 RPP40O75818 363 aaKnown RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 KRT38O76015 456 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 ELANEP08246 267 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 IFIT1P09914 478 aaKnown RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TMEM225BP0DP42 221 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 ADORA2AP29274 412 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 NTSR1P30989 418 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 BMPR1AP36894 532 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TSPAN7P41732 249 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 RBM5P52756 815 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 ATXN1P54253 815 aaKnown RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 NXPH1P58417 271 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 EIF4A1P60842 406 aaKnown RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 CBFBQ13951 182 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 RRP1BQ14684 758 aaKnown RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TTLL5Q6EMB2 1281 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAM180BQ6P0A1 224 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 C1orf122Q6ZSJ8 110 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 KRT27Q7Z3Y8 459 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 DTX2Q86UW9 622 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 LRRC71Q8N4P6 559 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 TCP11L2Q8N4U5 519 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 FEZF2Q8TBJ5 459 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 FAR2Q96K12 515 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 ZBTB45Q96K62 511 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 GPR63Q9BZJ6 419 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 AMBRA1Q9C0C7 1298 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 CHODLQ9H9P2 273 aa5.35□□□□□ -1.55
HMGB3P18-201ENST00000406327 AKIP1Q9NQ31 210 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms