RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FZD5Q13467 585 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 PABPC1LQ4VXU2 614 aaKnown RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 ZNF852Q6ZMS4 543 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 CLEC20AQ6ZU45 233 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 TMC6Q7Z403 805 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 ITFG1Q8TB96 612 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 TFAP2BQ92481 460 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 BAP1Q92560 729 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 SLITRK1Q96PX8 696 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 KCNK16Q96T55 309 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 TTYH3Q9C0H2 523 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 FBXO44Q9H4M3 255 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 LRRC4Q9HBW1 653 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 HEBP1Q9NRV9 189 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 NDRG2Q9UN36 371 aaKnown RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 MAGED2Q9UNF1 606 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 MRPS17Q9Y2R5 130 aaKnown RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 SLC38A8A6NNN8 435 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 LSM8O95777 96 aaKnown RBP11.1□□□□□ -0.63
RPAIN-204ENST00000405578 GYPCP04921 128 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 RHOP08100 348 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 MYL4P12829 197 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 YWHAQP27348 245 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 CDC25CP30307 473 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 CASP14P31944 242 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 ACADSBP45954 432 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 PPP3CCP48454 512 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SLC5A3P53794 718 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 CDR2Q01850 454 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 PDE4CQ08493 712 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SIM2Q14190 667 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-204ENST00000405578 ARHGAP15Q53QZ3 475 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SDHAF4Q5VUM1 108 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 PPP1R2P3Q6NXS1 205 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 TRIM72Q6ZMU5 477 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SIX6OS1Q8N1H7 587 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 TMEM35BQ8NCS4 154 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 OR8K1Q8NGG5 319 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 UBA3Q8TBC4 463 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 TRMT2BQ96GJ1 504 aaKnown RBP11.1□□□□□ -0.63
RPAIN-204ENST00000405578 HSFY1Q96LI6 401 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SMOQ99835 787 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 MIS12Q9H081 205 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 LHX5Q9H2C1 402 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 CHRDQ9H2X0 955 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SYNCQ9H7C4 482 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 GRPEL1Q9HAV7 217 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 AVENQ9NQS1 362 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SEPT11Q9NVA2 429 aaKnown RBP11.1□□□□□ -0.63
RPAIN-204ENST00000405578 AIPL1Q9NZN9 384 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 ZMYM5Q9UJ78 669 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 ZMIZ1Q9ULJ6 1067 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
RPAIN-204ENST00000405578 MRPS23Q9Y3D9 190 aaKnown RBP11.1□□□□□ -0.63
RPAIN-204ENST00000405578 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 SART1O43290 800 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 ADCY5O95622 1261 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 C1QTNF9P0C862 333 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 CDC25BP30305 580 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 GPR15P49685 360 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 CACNA2D1P54289 1103 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 KLHL30Q0D2K2 578 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 IFRD2Q12894 506 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 SRSF5Q13243 272 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 PPP2R5DQ14738 602 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 AASDHQ4L235 1098 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 TDRD12Q587J7 1177 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 TAF3Q5VWG9 929 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 NOP9Q86U38 636 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 ARHGAP18Q8N392 663 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 IPO4Q8TEX9 1081 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 KCTD13Q8WZ19 329 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 OVCA2Q8WZ82 227 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 MRPS31Q92665 395 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 MYRFLQ96LU7 910 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 ACP6Q9NPH0 428 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 CYLDQ9NQC7 956 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 TRPM5Q9NZQ8 1165 aa11.09□□□□□ -0.63
RPAIN-204ENST00000405578 DNMT3BQ9UBC3 853 aaKnown RBP11.09□□□□□ -0.63
RPAIN-204ENST00000405578 AP5Z1O43299 807 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 BEST1O76090 585 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 FBXO21O94952 628 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 CALCAP01258 141 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms