RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ATRIPQ8WXE1 791 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 SLC25A32Q9H2D1 315 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 FAM83DQ9H4H8 585 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 PPCSQ9HAB8 311 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 SYBUQ9NX95 663 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 MYRFQ9Y2G1 1151 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 MYO5BQ9ULV0 1848 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 CLTCL1P53675 1640 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 CCDC144AA2RUR9 1427 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 A1L4Q6 167 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 GRID2IPA4D2P6 1211 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 HNRNPDLO14979 420 aaKnown RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 FFAR2O15552 330 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 FESP07332 822 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 PDIA3P30101 505 aaKnown RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 PRKAR1BP31321 381 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 GALNT1Q10472 559 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 PUM3Q15397 648 aaKnown RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 TXNRD1Q16881 649 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZXDCQ2QGD7 858 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 TREML2Q5T2D2 321 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 TMTC4Q5T4D3 741 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 FAXCQ5TGI0 409 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 Q6ZPA2 131 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 EXOC8Q8IYI6 725 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 BEND2Q8NDZ0 799 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 PGBD1Q96JS3 809 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 EIF2AQ9BY44 585 aaKnown RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 GLOD4Q9HC38 313 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 OBP2BQ9NPH6 170 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 KLC4Q9NSK0 619 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 EPN1Q9Y6I3 576 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 IFT172Q9UG01 1749 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 MADDQ8WXG6 1647 aa5.84□□□□□ -1.47
HMGB3P19-201ENST00000403971 SYNMO15061 1565 aa5.84□□□□□ -1.48
HMGB3P19-201ENST00000403971 KAT6AQ92794 2004 aa5.84□□□□□ -1.48
HMGB3P19-201ENST00000403971 POLR2AP24928 1970 aaKnown RBP5.84□□□□□ -1.48
HMGB3P19-201ENST00000403971 MAST3O60307 1309 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 RIMS1Q86UR5 1692 aaKnown RBP5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 WDR27A2RRH5 827 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 LGALS16A8MUM7 142 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 PIP5K1BO14986 540 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 SLC16A3O15427 465 aaKnown RBP5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 NBNO60934 754 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 ADH4P08319 380 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 HKR1P10072 659 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 ARP10275 920 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 NR2F6P10588 404 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 EGR1P18146 543 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 MST1P26927 711 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 FOLR3P41439 243 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 FOXI1Q12951 378 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 FHL3Q13643 280 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 PGBD2Q6P3X8 592 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 DPY19L3Q6ZPD9 716 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 GGNQ86UU5 652 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 CAND1Q86VP6 1230 aaKnown RBP5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 C11orf44Q8N8P7 122 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZNF384Q8TF68 577 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 NEU4Q8WWR8 484 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 LINC00476Q8WZB0 136 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 RFKQ969G6 155 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 FAM227BQ96M60 508 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 CYP4F11Q9HBI6 524 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 TM7SF3Q9NS93 570 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 DNAJB11Q9UBS4 358 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 VPS51Q9UID3 782 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 HS3ST3A1Q9Y663 406 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 ERVK-7P63135 1459 aa5.83□□□□□ -1.48
HMGB3P19-201ENST00000403971 MPPED1O15442 326 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 TLR5O60602 858 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 COQ9O75208 318 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 IL6RP08887 468 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 C6P13671 934 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 IDEP14735 1019 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 CHKAP35790 457 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 PLA2G5P39877 138 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 MPLP40238 635 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 GATMP50440 423 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 TIAL1Q01085 375 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 ICA1Q05084 483 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 KRT72Q14CN4 511 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 PTPRRQ15256 657 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 PFKFB4Q16877 469 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 KAZNQ674X7 775 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 KIAA0895LQ68EN5 471 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 MRNIPQ6NTE8 343 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 USP17L6PQ6QN14 398 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 CLEC9AQ6UXN8 241 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 METTL25Q8N6Q8 603 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 ATG16L2Q8NAA4 619 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 STYXQ8WUJ0 223 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 XAGE5Q8WWM1 108 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 CAVIN3Q969G5 261 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 HIST1H2AAQ96QV6 131 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 HAPLN3Q96S86 360 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 SIN3AQ96ST3 1273 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZBTB26Q9HCK0 441 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms