RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PPM1JQ5JR12 505 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 SATL1Q86VE3 508 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 EGFL6Q8IUX8 553 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PPP4R1Q8TF05 950 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 GDPD5Q8WTR4 605 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 EPAS1Q99814 870 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 TIPINQ9BVW5 301 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 XAB2Q9HCS7 855 aaKnown RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 SMYD2Q9NRG4 433 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FAM49BQ9NUQ9 324 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 RHBDL2Q9NX52 303 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 APPL1Q9UKG1 709 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 ADCY3O60266 1144 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 SERPINB5P36952 375 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 BBS12Q6ZW61 710 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 SPATA24Q86W54 205 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 ZNF276Q8N554 614 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 RXFP2Q8WXD0 754 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 AGAP3Q96P47 875 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 GORASP1Q9BQQ3 440 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 RNPEPQ9H4A4 650 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 ZNF358Q9NW07 568 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 ARHGAP28Q9P2N2 729 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 RTN3O95197 1032 aaPredicted RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 APBA3O96018 575 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 LDHAP00338 332 aaKnown RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 RAG1P15918 1043 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 NELFEP18615 380 aaKnown RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 YWHAEP62258 255 aaKnown RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 ZNF667Q5HYK9 610 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 EFHC1Q5JVL4 640 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 CCNYQ8ND76 341 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 ADAM32Q8TC27 787 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 NSUN6Q8TEA1 469 aaKnown RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 PIWIL1Q96J94 861 aaKnown RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 CNBD2Q96M20 576 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 KLC2Q9H0B6 622 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 DHX35Q9H5Z1 703 aaKnown RBP9.51□□□□□ -0.89
HPS4-203ENST00000402105 PLLPQ9Y342 182 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 C10orf71Q711Q0 1435 aa9.51□□□□□ -0.89
HPS4-203ENST00000402105 SIGLEC16A6NMB1 481 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 NOP56O00567 594 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 PMM2O15305 246 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 B4GALT5O43286 388 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
HPS4-203ENST00000402105 LYPLA2O95372 231 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CXCL8P10145 99 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 PGGT1BP53609 377 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 YWHAZP63104 245 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 SP2Q02086 613 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CNTN2Q02246 1040 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 DLG1Q12959 904 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 SFT2D3Q587I9 215 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 N4BP2L1Q5TBK1 243 aaPredicted RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 CES4AQ5XG92 561 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 C15orf39Q6ZRI6 1047 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 VSIG10LQ86VR7 867 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TMEM192Q8IY95 271 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 C12orf29Q8N999 325 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 STKLD1Q8NE28 680 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CEP70Q8NHQ1 597 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 ZNF398Q8TD17 642 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 USP13Q92995 863 aaPredicted RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 NDNQ99608 321 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 NTPCRQ9BSD7 190 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 OCEL1Q9H607 264 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 SLC38A10Q9HBR0 1119 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 PDP2Q9P2J9 529 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 WDR27A2RRH5 827 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CAPN8A6NHC0 703 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 APOC4-APOC2K7ER74 178 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 PEX1O43933 1283 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TM7SF2O76062 418 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 APOC2P02655 101 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 ITGB3P05106 788 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 GSTA2P09210 222 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TGFB2P61812 414 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 AMHR2Q16671 573 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TRMT5Q32P41 509 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 IL31Q6EBC2 164 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 DPY19L2Q6NUT2 758 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 SCUBE3Q8IX30 993 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TWNKQ96RR1 684 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 UBE2OQ9C0C9 1292 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 KCNK4Q9NYG8 393 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CDK5RAP2Q96SN8 1893 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CNTNAP2Q9UHC6 1331 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 A8MXQ7 604 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 PFDN1O60925 122 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 ETV4P43268 484 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 COPAP53621 1224 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 ATXN1P54253 815 aaKnown RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 MRPS5P82675 430 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms