RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 PLA1AQ53H76 456 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 DCAF12L1Q5VU92 463 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 FBXO42Q6P3S6 717 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 TOM1L2Q6ZVM7 507 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 GAS2L3Q86XJ1 694 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 NGDNQ8NEJ9 315 aaKnown RBP4.29□□□□□ -1.72
RPA3-203ENST00000401447 ATG4AQ8WYN0 398 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 TTC17Q96AE7 1141 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 HAPLN3Q96S86 360 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 PPP1R9BQ96SB3 815 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 MESP1Q9BRJ9 268 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 KLK15Q9H2R5 256 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 ZNF287Q9HBT7 754 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 CPNE5Q9HCH3 593 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 A1CFQ9NQ94 594 aaKnown RBP4.29□□□□□ -1.72
RPA3-203ENST00000401447 TRMT13Q9NUP7 481 aaKnown RBP4.29□□□□□ -1.72
RPA3-203ENST00000401447 ASB6Q9NWX5 421 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 CPNE7Q9UBL6 633 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 NDRG4Q9ULP0 352 aaKnown RBP4.29□□□□□ -1.72
RPA3-203ENST00000401447 AKAP12Q02952 1782 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 USP6P35125 1406 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 LMO7Q8WWI1 1683 aa4.29□□□□□ -1.72
RPA3-203ENST00000401447 TNRC6CQ9HCJ0 1690 aaKnown RBP4.29□□□□□ -1.72
RPA3-203ENST00000401447 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 MBD3L4A6NDZ8 208 aaPredicted RBP4.28□□□□□ -1.72
RPA3-203ENST00000401447 MBD3L3A6NE82 208 aaPredicted RBP4.28□□□□□ -1.72
RPA3-203ENST00000401447 hCG_1984214I3L0E3 225 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 RASSF9O75901 435 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 ONECUT2O95948 504 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 C1RP00736 705 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 ZKSCAN1P17029 563 aaPredicted RBP4.28□□□□□ -1.72
RPA3-203ENST00000401447 KLRC1P26715 233 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 CCT8P50990 548 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 SOX10P56693 466 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 MYO1EQ12965 1108 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 TREML2Q5T2D2 321 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 MAVSQ7Z434 540 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 ZNF804AQ7Z570 1209 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 DTX2Q86UW9 622 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 DGKHQ86XP1 1220 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 BPIFB1Q8TDL5 484 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 OSCP1Q8WVF1 389 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 MAML1Q92585 1016 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 RFKQ969G6 155 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 SPSB4Q96A44 273 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
RPA3-203ENST00000401447 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 NMD3Q96D46 503 aaKnown RBP4.28□□□□□ -1.72
RPA3-203ENST00000401447 APIPQ96GX9 242 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 R3HDMLQ9H3Y0 253 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 CXorf36Q9H7Y0 433 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 SMURF2Q9HAU4 748 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 SERHLQ9NQF3 203 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 ARHGEF3Q9NR81 526 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 IL17RBQ9NRM6 502 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 CHPF2Q9P2E5 772 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 HDAC9Q9UKV0 1011 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 ST3GAL5Q9UNP4 418 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 SH2B3Q9UQQ2 575 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 SSX2IPQ9Y2D8 614 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 MRPS17Q9Y2R5 130 aaKnown RBP4.28□□□□□ -1.72
RPA3-203ENST00000401447 A0A0C4DFX4 3053 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 NHSQ6T4R5 1651 aa4.28□□□□□ -1.72
RPA3-203ENST00000401447 EIF3AQ14152 1382 aaKnown RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 IFT172Q9UG01 1749 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 LOC102723971A0A1B0GUV8 181 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 PYCARD-AS1I3L0S3 204 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 QSOX1O00391 747 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 PARNO95453 639 aaKnown RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 MYF5P13349 255 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 RPL17P18621 184 aaKnown RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 DRD4P21917 467 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 PTH2RP49190 550 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 DGKEP52429 567 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 TPTEP56180 551 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 INSCQ1MX18 579 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 CERCAMQ5T4B2 595 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 DEPDC1Q5TB30 811 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 CACHD1Q5VU97 1274 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 ZNF280BQ86YH2 543 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 SPARTQ8N0X7 666 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 LRRC71Q8N4P6 559 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 SMCR8Q8TEV9 937 aaPredicted RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 IPCEF1Q8WWN9 437 aaPredicted RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 TIFAQ96CG3 184 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 TIMP4Q99727 224 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 STK31Q9BXU1 1019 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 BHMT2Q9H2M3 363 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 SEMA4GQ9NTN9 838 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 PTGFRNQ9P2B2 879 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 DKK3Q9UBP4 350 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
RPA3-203ENST00000401447 WNT6Q9Y6F9 365 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 TRPM1Q7Z4N2 1603 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 NUP155O75694 1391 aa4.27□□□□□ -1.73
RPA3-203ENST00000401447 KNDC1Q76NI1 1749 aa4.26□□□□□ -1.73
RPA3-203ENST00000401447 WDR17Q8IZU2 1322 aa4.26□□□□□ -1.73
RPA3-203ENST00000401447 TMEM233B4DJY2 109 aa4.26□□□□□ -1.73
RPA3-203ENST00000401447 CCP110O43303 1012 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms