RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NAGPAQ9UK23 515 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CCL26Q9Y258 94 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SOBPA7XYQ1 873 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TMCO5BA8MYB1 307 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ANHXE9PGG2 379 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNF263O14978 683 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TLR5O60602 858 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GJB6O95452 261 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ABL1P00519 1130 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RARGP13631 454 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DDX6P26196 483 aaKnown RBP eCLIP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 WEE1P30291 646 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 VIPR2P41587 438 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NSFP46459 744 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PITX1P78337 314 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 HTR4Q13639 388 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARHGAP15Q53QZ3 475 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TANGO2Q6ICL3 276 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 OR6B2Q6IFH4 312 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PARM1Q6UWI2 310 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MCOLN2Q8IZK6 566 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZDHHC14Q8IZN3 488 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CMTM8Q8IZV2 173 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 EDEM1Q92611 657 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FGF14Q92915 247 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 USP13Q92995 863 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 WBP2Q969T9 261 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 C18orf8Q96DM3 657 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NECAB3Q96P71 396 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC2A13Q96QE2 648 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RPP25Q9BUL9 199 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ADAM33Q9BZ11 813 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ISCUQ9H1K1 167 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLITRK6Q9H5Y7 841 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TRPV4Q9HBA0 871 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PRKAG3Q9UGI9 489 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FAM50BQ9Y247 325 aa13.01□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GRAP2O75791 330 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC34A2O95436 690 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GZMAP12544 262 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PFKLP17858 780 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RRM1P23921 792 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SCNN1AP37088 669 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PSEN1P49768 467 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC7A9P82251 487 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC6A3Q01959 620 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GFPT1Q06210 699 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 USP4Q13107 963 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 OTUD1Q5VV17 481 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SYPL2Q5VXT5 272 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARHGAP18Q8N392 663 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNF276Q8N554 614 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SMARCD2Q92925 531 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PLA2G2FQ9BZM2 168 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NHEJ1Q9H9Q4 299 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ASNSD1Q9NWL6 643 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ADAM22Q9P0K1 906 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TMEM59LQ9UK28 342 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CPQQ9Y646 472 aa13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZFP37Q9Y6Q3 630 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-203ENST00000399082 COL4A2P08572 1712 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TRAV19A0A0A6YYK7 116 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GOLGA8SH3BPF8 625 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GREM1O60565 184 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RTN2O75298 545 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DAB1O75553 588 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CKMP06732 381 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 HDCP19113 662 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MTF1Q14872 753 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC18A3Q16572 532 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PPP1R15BQ5SWA1 713 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FAM102AQ5T9C2 384 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 KLHDC10Q6PID8 442 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 VITQ6UXI7 678 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 BEND5Q7L4P6 421 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZDHHC17Q8IUH5 632 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 JOSD2Q8TAC2 188 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FAM149B1Q96BN6 582 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ACSF2Q96CM8 615 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 KXD1Q9BQD3 176 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms