RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZNF143P52747 638 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 GRM1Q13255 1194 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 BLMHQ13867 455 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 CHI3L2Q15782 390 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 CHST13Q8NET6 341 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 UCMAQ8WVF2 138 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 HPDLQ96IR7 371 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 PGLYRP2Q96PD5 576 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 RNF157Q96PX1 679 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 NMRK1Q9NWW6 199 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 PPARGC1AQ9UBK2 798 aaKnown RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 MFHAS1Q9Y4C4 1052 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 A0A087WZ62 844 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 KIF1CO43896 1103 aaKnown RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 VTNP04004 478 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 AMPD1P23109 780 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 BCAR1P56945 870 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 MBTD1Q05BQ5 628 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 AMHR2Q16671 573 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 PQLC3Q8N755 202 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 ALKBH8Q96BT7 664 aaKnown RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 MMP19Q99542 508 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 FDXACB1Q9BRP7 624 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 SAR1AQ9NR31 198 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 IL1RAPL1Q9NZN1 696 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 LNPEPQ9UIQ6 1025 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 LRRC42Q9Y546 428 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 WASF2Q9Y6W5 498 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 C2CD4BA6NLJ0 364 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 ENO4A6NNW6 628 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 TRAFD1O14545 582 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-205ENST00000398978 CAPN9O14815 690 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 RXRBP28702 533 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 SLC18A2Q05940 514 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 CCDC14Q49A88 953 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 WASHC2DQ5SRD0 308 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 LBX2Q6XYB7 198 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 PCDH19Q8TAB3 1148 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 DNAJC9Q8WXX5 260 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 BATF3Q9NR55 127 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 DPPA5A6NC42 116 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 METTL18O95568 372 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 CCNG1P51959 295 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 SURF1Q15526 300 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 PMF1Q6P1K2 205 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 C16orf46Q6P387 395 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 SLC26A11Q86WA9 606 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 CLEC4CQ8WTT0 213 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 FAM172AQ8WUF8 416 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 CEP41Q9BYV8 373 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 SPATC1LQ9H0A9 340 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 FZD8Q9H461 694 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 POPDC2Q9HBU9 364 aa20.29■□□□□ 0.84
COL13A1-205ENST00000398978 C1QAP02745 245 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 ALDH18A1P54886 795 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 THOC5Q13769 683 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 VGLL4Q14135 290 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 BSPRYQ5W0U4 402 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 NAIF1Q69YI7 327 aaPredicted RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 CCDC62Q6P9F0 684 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 FAM161BQ96MY7 647 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 CNTN3Q9P232 1028 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 WDR35Q9P2L0 1181 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 FETUBQ9UGM5 382 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 GINS2Q9Y248 185 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 ANK1P16157 1881 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 B2RBV5 119 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 TBX10O75333 385 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 GBE1Q04446 702 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 TTC39BQ5VTQ0 682 aaPredicted RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 SLC25A41Q8N5S1 370 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 PDCD7Q8N8D1 485 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 ENDOVQ8N8Q3 282 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 CNPY3Q9BT09 278 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 ARHGEF4Q9NR80 690 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 LINGO3P0C6S8 592 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 OSBPP22059 807 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 STIP1P31948 543 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 GOLGA7BQ2TAP0 167 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 SLC10A6Q3KNW5 377 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 SNX30Q5VWJ9 437 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 UNC5AQ6ZN44 842 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 ACOT1Q86TX2 421 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 EBF4Q9BQW3 602 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 SNRNP25Q9BV90 132 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 TLE6Q9H808 572 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 DCLRE1BQ9H816 532 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 ETNK2Q9NVF9 386 aa20.28■□□□□ 0.84
COL13A1-205ENST00000398978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 MTO1Q9Y2Z2 717 aaKnown RBP20.28■□□□□ 0.84
COL13A1-205ENST00000398978 POLR2AP24928 1970 aaKnown RBP20.27■□□□□ 0.84
COL13A1-205ENST00000398978 MEI4A8MW99 385 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 PPEF2O14830 753 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 PFKMP08237 780 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 PPP1R26Q5T8A7 1209 aaPredicted RBP20.27■□□□□ 0.84
COL13A1-205ENST00000398978 NDUFAF2Q8N183 169 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 NDC80O14777 642 aa20.27■□□□□ 0.84
COL13A1-205ENST00000398978 ADORA2AP29274 412 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms