RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZNF483Q8TF39 744 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 C10orf82Q8WW14 230 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 NLRP4Q96MN2 994 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 SLITRK1Q96PX8 696 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 TMEM120AQ9BXJ8 343 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ADNPQ9H2P0 1102 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 JPH1Q9HDC5 661 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 WRAP73Q9P2S5 460 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 AGAP1Q9UPQ3 857 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 AURKCQ9UQB9 309 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 MYH13Q9UKX3 1938 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 NEMP1O14524 444 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 PEX11AO75192 247 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 FOXN2P32314 431 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 MTM1Q13496 603 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 SLC12A1Q13621 1099 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 FRG1Q14331 258 aaKnown RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 TARBP2Q15633 366 aaKnown RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 IYDQ6PHW0 289 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 LRRC74BQ6ZQY2 392 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 C4orf50Q6ZRC1 276 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ADCK1Q86TW2 530 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 TTC8Q8TAM2 541 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 DEPTORQ8TB45 409 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 APOPT1Q96IL0 206 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 CNPY3Q9BT09 278 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 RNF146Q9NTX7 359 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ORC6Q9Y5N6 252 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ERI2A8K979 691 aaKnown RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 CHADO15335 359 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 GNA15P30679 374 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 MXD4Q14582 209 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 WDR72Q3MJ13 1102 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 GJC2Q5T442 439 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 MIS18BP1Q6P0N0 1132 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ABHD15Q6UXT9 468 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ACAD11Q709F0 780 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 SLC47A2Q86VL8 602 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 SCUBE1Q8IWY4 988 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 GDPD5Q8WTR4 605 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 SLC44A1Q8WWI5 657 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 TSPAN18Q96SJ8 248 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 LRRC4CQ9HCJ2 640 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 CNGB3Q9NQW8 809 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 TCRBV7S2A1N4TA0A589 114 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 SYCE1LA8MT33 242 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 PSMG1O95456 288 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 SNRPAP09012 282 aaKnown RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 DAB2P98082 770 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 COG2Q14746 738 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 KLC3Q6P597 504 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 PTF1AQ7RTS3 328 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 HEATR4Q86WZ0 1026 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ANKLE1Q8NAG6 615 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 CYGBQ8WWM9 190 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 RMDN2Q96LZ7 410 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 GPR101Q96P66 508 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-205ENST00000397611 KLHL4Q9C0H6 718 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ZDHHC7Q9NXF8 308 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF212Q9UDV6 495 aa5.65□□□□□ -1.51
PTPRD-205ENST00000397611 IGKV6-21A0A0C4DH24 114 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SPATA31C2B4DYI2 1134 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ARHGEF9O43307 516 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 STRNO43815 780 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ENTPD5O75356 428 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 RARBP10826 455 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SCNN1BP51168 640 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 IRF5Q13568 498 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PCBP1Q15365 356 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 TEDDM1Q5T9Z0 273 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 TIFABQ6ZNK6 161 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZBTB8OSQ8IWT0 167 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ACAD9Q9H845 621 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GPAMQ9HCL2 828 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 RBAKQ9NYW8 714 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SIRPGQ9P1W8 387 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 TLK1Q9UKI8 766 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 MEI4A8MW99 385 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 DPYSL4O14531 572 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PEX1O43933 1283 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 HSPA8P11142 646 aaKnown RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 P4HA1P13674 534 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KCNA2P16389 499 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ARL2P36404 184 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 HK2P52789 917 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ACTR3P61158 418 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SLC39A4Q6P5W5 647 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KYAT3Q6YP21 454 aaKnown RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GPR141Q7Z602 305 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZDHHC17Q8IUH5 632 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GALNT15Q8N3T1 639 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 TMA16Q96EY4 203 aaKnown RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 DCUN1D5Q9BTE7 237 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SNX25Q9H3E2 840 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SLC9A2Q9UBY0 812 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 AIM2O14862 343 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SLC22A2O15244 555 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 AKAP10O43572 662 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 IL18RAPO95256 599 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms