RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ALG3Q92685 438 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 CD101Q93033 1021 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 ACSF2Q96CM8 615 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-204ENST00000397443 TBCBQ99426 244 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 ZWILCHQ9H900 591 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 KLHL11Q9NVR0 708 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 SCML2Q9UQR0 700 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 GREB1Q4ZG55 1949 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 GLI1P08151 1106 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 BTBD8Q5XKL5 378 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 TXNRD3NBQ6F5E7 133 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 UBL4BQ8N7F7 174 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 KREMEN2Q8NCW0 462 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 TIFAQ96CG3 184 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 SLC2A13Q96QE2 648 aa22.15■■□□□ 1.14
CPNE1-204ENST00000397443 DDX23Q9BUQ8 820 aaKnown RBP22.15■■□□□ 1.14
CPNE1-204ENST00000397443 NOS2P35228 1153 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 NME3Q13232 169 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 ZNF211Q13398 564 aaPredicted RBP22.14■■□□□ 1.14
CPNE1-204ENST00000397443 SMTNL2Q2TAL5 461 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 ATP13A4Q4VNC1 1196 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 OSER1Q9NX31 292 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 CALCOCO1Q9P1Z2 691 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 HSFX1Q9UBD0 423 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 LCMT1Q9UIC8 334 aa22.14■■□□□ 1.14
CPNE1-204ENST00000397443 MIF4GDA9UHW6 222 aaKnown RBP22.14■■□□□ 1.13
CPNE1-204ENST00000397443 DPYSL4O14531 572 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 DESP17661 470 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 MIPP30301 263 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 CTNNA1P35221 906 aaKnown RBP22.14■■□□□ 1.13
CPNE1-204ENST00000397443 CLCN4P51793 760 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 VEPH1Q14D04 833 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 LLGL1Q15334 1064 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 KCNT1Q5JUK3 1230 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 LILRA6Q6PI73 481 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 ARCQ7LC44 396 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 SCML4Q8N228 414 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 SMARCAL1Q9NZC9 954 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 EHD2Q9NZN4 543 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 FBXW11Q9UKB1 542 aa22.14■■□□□ 1.13
CPNE1-204ENST00000397443 M0QYT0 321 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 C8AP07357 584 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 IL1R2P27930 398 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 RGS19P49795 217 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 EPHB3P54753 998 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 PLD1Q13393 1074 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 SLC25A52Q3SY17 297 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 DCAF12L1Q5VU92 463 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 AADACL2Q6P093 401 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 RHOT1Q8IXI2 618 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 IL37Q9NZH6 218 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 STAP1Q9ULZ2 295 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 PCDHA3Q9Y5H8 950 aa22.13■■□□□ 1.13
CPNE1-204ENST00000397443 TRIOBPQ9H2D6 2365 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 CCDC66A2RUB6 948 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 PTPN9P43378 593 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 HDAC4P56524 1084 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 RSRC2Q7L4I2 434 aaKnown RBP22.12■■□□□ 1.13
CPNE1-204ENST00000397443 ADGRD2Q7Z7M1 963 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 MON1AQ86VX9 555 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 MS4A14Q96JA4 679 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 ABCC13Q9NSE7 274 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 USP18Q9UMW8 372 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 LRG1P02750 347 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 CSH1P0DML2 217 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 CSH2P0DML3 217 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 EPCAMP16422 314 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 TCP1P17987 556 aaKnown RBP22.12■■□□□ 1.13
CPNE1-204ENST00000397443 CTNNA2P26232 953 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 PEX5P50542 639 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 OTUD1Q5VV17 481 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-204ENST00000397443 ZNF512Q96ME7 567 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-204ENST00000397443 SLITRK1Q96PX8 696 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 FAM204AQ9H8W3 233 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 MRFAP1Q9Y605 127 aa22.12■■□□□ 1.13
CPNE1-204ENST00000397443 CEP104O60308 925 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 CLASP2O75122 1294 aaKnown RBP22.11■■□□□ 1.13
CPNE1-204ENST00000397443 HMGA1P17096 107 aaKnown RBP22.11■■□□□ 1.13
CPNE1-204ENST00000397443 SLC25A11Q02978 314 aaKnown RBP22.11■■□□□ 1.13
CPNE1-204ENST00000397443 HADHQ16836 314 aaKnown RBP22.11■■□□□ 1.13
CPNE1-204ENST00000397443 CCDC149Q6ZUS6 474 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 DNAJB7Q7Z6W7 309 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-204ENST00000397443 FAM131BQ86XD5 332 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 RNF139Q8WU17 664 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 SLC22A17Q8WUG5 538 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 PEBP4Q96S96 227 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 NPY6RQ99463 290 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 MAN1C1Q9NR34 630 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 DDIT4Q9NX09 232 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 CDC23Q9UJX2 597 aa22.11■■□□□ 1.13
CPNE1-204ENST00000397443 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.11■■□□□ 1.13
CPNE1-204ENST00000397443 FAM92AA1XBS5 289 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 PI4K2BG5E9Z4 385 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 PSTPIP1O43586 416 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 PRPSAP2O60256 369 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 RWDD2BP57060 319 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 DEUP1Q05D60 604 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 ACAP1Q15027 740 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 HSPH1Q92598 858 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 TLR8Q9NR97 1041 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms