RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CYP17A1P05093 508 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 ADH5P11766 374 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 TDGF1P13385 188 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 LRMPQ12912 555 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 GAS6Q14393 721 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 CNGA2Q16280 664 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 LPAL2Q16609 132 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 MEA1Q16626 185 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 HSF5Q4G112 596 aaPredicted RBP14.66□□□□□ -0.06
SEC13-204ENST00000397099 PM20D1Q6GTS8 502 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 PRR23BQ6ZRT6 265 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 GPRIN1Q7Z2K8 1008 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 PIGZQ86VD9 579 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 LONP2Q86WA8 852 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 SCML4Q8N228 414 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
SEC13-204ENST00000397099 KCNV2Q8TDN2 545 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 KCTD13Q8WZ19 329 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 CNOT6LQ96LI5 555 aaKnown RBP14.66□□□□□ -0.06
SEC13-204ENST00000397099 KLF16Q9BXK1 252 aaPredicted RBP14.66□□□□□ -0.06
SEC13-204ENST00000397099 DCLK3Q9C098 648 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 THAP9Q9H5L6 903 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 LRRC4Q9HBW1 653 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 GMEB2Q9UKD1 530 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 PCDHB4Q9Y5E5 795 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 DMXL1Q9Y485 3027 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 A0A1W2PQH9 124 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 O00370 1275 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 HOXC11O43248 304 aaPredicted RBP14.65□□□□□ -0.06
SEC13-204ENST00000397099 FNTBP49356 437 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 TKTL1P51854 596 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 GOLGA7BQ2TAP0 167 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 C10orf120Q5SQS8 335 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 HEATR6Q6AI08 1181 aaKnown RBP14.65□□□□□ -0.06
SEC13-204ENST00000397099 GBP6Q6ZN66 633 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 SYT13Q7L8C5 426 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 TTC30AQ86WT1 665 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 CHFRQ96EP1 664 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 IPO9Q96P70 1041 aaKnown RBP14.65□□□□□ -0.06
SEC13-204ENST00000397099 PNKPQ96T60 521 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 CNGB3Q9NQW8 809 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 WDR35Q9P2L0 1181 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 SLC8A2Q9UPR5 921 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
SEC13-204ENST00000397099 EP300Q09472 2414 aaPredicted RBP14.65□□□□□ -0.06
SEC13-204ENST00000397099 A0A0A0MRY4 1105 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 MED7O43513 233 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 RNF40O75150 1001 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 EGFP01133 1207 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 APODP05090 189 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 TNFRSF4P43489 277 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 MFAP3P55082 362 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 YWHAGP61981 247 aaKnown RBP eCLIP14.64□□□□□ -0.07
SEC13-204ENST00000397099 MRPS21P82921 87 aaKnown RBP14.64□□□□□ -0.07
SEC13-204ENST00000397099 DMWDQ09019 674 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 E2F5Q15329 346 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 RHBDF2Q6PJF5 856 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 RSRC2Q7L4I2 434 aaKnown RBP14.64□□□□□ -0.07
SEC13-204ENST00000397099 WDR5BQ86VZ2 330 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 SIX6OS1Q8N1H7 587 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 IRGQQ8WZA9 623 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 RMDN1Q96DB5 314 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 HSFY1Q96LI6 401 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 XPO6Q96QU8 1125 aaKnown RBP14.64□□□□□ -0.07
SEC13-204ENST00000397099 TRIM62Q9BVG3 475 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 INTS2Q9H0H0 1204 aaKnown RBP14.64□□□□□ -0.07
SEC13-204ENST00000397099 NMUR1Q9HB89 426 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 SPHK2Q9NRA0 654 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.64□□□□□ -0.07
SEC13-204ENST00000397099 OTOGLQ3ZCN5 2332 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 KIAA1549LQ6ZVL6 1849 aa14.64□□□□□ -0.07
SEC13-204ENST00000397099 SPTBN4Q9H254 2564 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 K7ESF4 209 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 FBXO21O94952 628 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 CHKAP35790 457 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 OPRD1P41143 372 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 GRIA2P42262 883 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 MTIF2P46199 727 aaKnown RBP14.63□□□□□ -0.07
SEC13-204ENST00000397099 ZNF132P52740 706 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 FOXK2Q01167 660 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 PDE4CQ08493 712 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 SIM2Q14190 667 aaPredicted RBP14.63□□□□□ -0.07
SEC13-204ENST00000397099 MAN2A1Q16706 1144 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 PKDCCQ504Y2 493 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 LY6G5CQ5SRR4 150 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 TRIM65Q6PJ69 517 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 ERMP1Q7Z2K6 904 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 TRMT11Q7Z4G4 463 aaKnown RBP14.63□□□□□ -0.07
SEC13-204ENST00000397099 SCD5Q86SK9 330 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
SEC13-204ENST00000397099 GOLGA1Q92805 767 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 UBE2TQ9NPD8 197 aaPredicted RBP14.63□□□□□ -0.07
SEC13-204ENST00000397099 ABCC13Q9NSE7 274 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 LMBRD1Q9NUN5 540 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 OSER1Q9NX31 292 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 MARK1Q9P0L2 795 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 DEC1Q9P2X7 70 aa14.63□□□□□ -0.07
SEC13-204ENST00000397099 USP18Q9UMW8 372 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms