RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MDGA1Q8NFP4 955 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 EEF2KMTQ96G04 330 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
NEDD8-202ENST00000396828 FNBP1Q96RU3 617 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 KIAA1586Q9HCI6 787 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 IFNKQ9P0W0 207 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 ARMCX3Q9UH62 379 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-202ENST00000396828 LIMA1Q9UHB6 759 aaKnown RBP10.95□□□□□ -0.66
NEDD8-202ENST00000396828 THADAQ6YHU6 1953 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 LAMA5O15230 3695 aa10.95□□□□□ -0.66
NEDD8-202ENST00000396828 DMXL2Q8TDJ6 3036 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 LRRC10BA6NIK2 292 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 LRRIQ3A6PVS8 624 aaPredicted RBP10.94□□□□□ -0.66
NEDD8-202ENST00000396828 A8MXQ7 604 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 PATE3B3GLJ2 98 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 SGK1O00141 431 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 PES1O00541 588 aaKnown RBP10.94□□□□□ -0.66
NEDD8-202ENST00000396828 TNFRSF10BO14763 440 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 GIPC1O14908 333 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 TRIM66O15016 1216 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 MAPK13O15264 365 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 BEST1O76090 585 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 NFATC1O95644 943 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 KRT13P13646 458 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
NEDD8-202ENST00000396828 ANXA13P27216 316 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 ZNF75DP51815 510 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 MARSP56192 900 aaKnown RBP10.94□□□□□ -0.66
NEDD8-202ENST00000396828 DLG4P78352 724 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 NR1H3Q13133 447 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 ORC1Q13415 861 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 KRT31Q15323 416 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 MAPRE1Q15691 268 aaKnown RBP10.94□□□□□ -0.66
NEDD8-202ENST00000396828 ANO7Q6IWH7 933 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 RASSF3Q86WH2 238 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 IRF2BP1Q8IU81 584 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 FAM186BQ8IYM0 893 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 PHTF2Q8N3S3 785 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 ALLCQ8N6M5 410 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 B3GALNT2Q8NCR0 500 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 TSTD1Q8NFU3 115 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 RLN3Q8WXF3 142 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 TUBGCP2Q9BSJ2 902 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 DMAC2Q9NW81 257 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 HCN2Q9UL51 889 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 PCDHGA5Q9Y5G8 931 aa10.94□□□□□ -0.66
NEDD8-202ENST00000396828 FREM2Q5SZK8 3169 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 LNP1A1A4G5 178 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 BCLAF3A2AJT9 711 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 C4orf47A7E2U8 309 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TRIM24O15164 1050 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 COCHO43405 550 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 FOXD2O60548 495 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 ADAM23O75077 832 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 KCNK5O95279 499 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 VNN1O95497 513 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 STAU1O95793 577 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 C4BPAP04003 597 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 MBL2P11226 248 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 PMLP29590 882 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 GBP1P32455 592 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TIE1P35590 1138 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 COPB1P53618 953 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TNNC1P63316 161 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TRPC3Q13507 836 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 CRY1Q16526 586 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 MAN2A1Q16706 1144 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 LY6G5CQ5SRR4 150 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 FKBP15Q5T1M5 1219 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 RNF43Q68DV7 783 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 INTS8Q75QN2 995 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TTC30AQ86WT1 665 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 DRC7Q8IY82 874 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 NUP93Q8N1F7 819 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 NAT16Q8N8M0 369 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 IL17RCQ8NAC3 791 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TXNDC5Q8NBS9 432 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 ZMIZ2Q8NF64 920 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 PARD3BQ8TEW8 1205 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 ACDQ96AP0 544 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 MRFAP1L1Q96HT8 127 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 LSM14BQ9BX40 385 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 XPO4Q9C0E2 1151 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 ELOVL4Q9GZR5 314 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 VPS16Q9H269 839 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 CCSER2Q9H7U1 834 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 VPS45Q9NRW7 570 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 TAB2Q9NYJ8 693 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 HMGXB4Q9UGU5 601 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 MMP17Q9ULZ9 603 aa10.93□□□□□ -0.66
NEDD8-202ENST00000396828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 MYO18AQ92614 2054 aaKnown RBP10.93□□□□□ -0.66
NEDD8-202ENST00000396828 NBEAQ8NFP9 2946 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 A0A1B0GTH6 734 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 AP5Z1O43299 807 aa10.92□□□□□ -0.66
NEDD8-202ENST00000396828 KAT7O95251 611 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms