RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 GPD2P43304 727 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 IREB2P48200 963 aaKnown RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 PHC1P78364 1004 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 TRAP1Q12931 704 aaKnown RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 SELENBP1Q13228 472 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 USP49Q70CQ1 688 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 RAPH1Q70E73 1250 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 LPCAT2Q7L5N7 544 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 ADAMTSL2Q86TH1 951 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 LRRTM3Q86VH5 581 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 RAB3IL1Q8TBN0 382 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 CEP170P1Q96L14 293 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 SECISBP2Q96T21 854 aaKnown RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 CYTH2Q99418 400 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 ZNF717Q9BY31 904 aaPredicted RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 KLC2Q9H0B6 622 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 DEFB129Q9H1M3 183 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 PABPC3Q9H361 631 aaKnown RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.21□□□□□ -0.933e-9■■□□□ 13
MSH5-205ENST00000395853 ERGIC3Q9Y282 383 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 TMEM120BA0PK00 339 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 hCG_2039718K7EN88 272 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 FOXN3O00409 490 aaPredicted RBP9.21□□□□□ -0.94
MSH5-205ENST00000395853 FGF18O76093 207 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 THRAP10827 490 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 TPTEP56180 551 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 GTF2IP78347 998 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 SP3Q02447 781 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 FCHO2Q0JRZ9 810 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 PPP2R5EQ16537 467 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 MTERF2Q49AM1 385 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 TAF1BQ53T94 588 aaPredicted RBP9.21□□□□□ -0.94
MSH5-205ENST00000395853 C6orf163Q5TEZ5 329 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 KLHDC7AQ5VTJ3 777 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 ITPRIPL1Q6GPH6 555 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 ZNF704Q6ZNC4 412 aaPredicted RBP9.21□□□□□ -0.94
MSH5-205ENST00000395853 ADAMTS16Q8TE57 1224 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 FMO2Q99518 471 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 SYTL2Q9HCH5 934 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 CD93Q9NPY3 652 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 SEPT11Q9NVA2 429 aaKnown RBP9.21□□□□□ -0.94
MSH5-205ENST00000395853 EMSYQ7Z589 1322 aa9.21□□□□□ -0.94
MSH5-205ENST00000395853 MYH11P35749 1972 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 MIF4GDA9UHW6 222 aaKnown RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 ATP6V1G2-DDX39BF2Z307 99 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 XPO1O14980 1071 aaKnown RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 DAPK3O43293 454 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 KLHL41O60662 606 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 FAM228BP0C875 321 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ICAM2P13598 275 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 AMPD1P23109 780 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 NFIAQ12857 509 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 SQLEQ14534 574 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 DLGAP5Q15398 846 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 SFT2D3Q587I9 215 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 MARVELD2Q8N4S9 558 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 PNMA1Q8ND90 353 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 RFWD2Q8NHY2 731 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 OMA1Q96E52 524 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 MAGEB18Q96M61 343 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 SERPINB12Q96P63 405 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 BTBD9Q96Q07 612 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ZMYND12Q9H0C1 365 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ZNF696Q9H7X3 374 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 TAB2Q9NYJ8 693 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ANKMY1Q9P2S6 941 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ZFP69BQ9UJL9 534 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 TMEM59LQ9UK28 342 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 WDR91A4D1P6 747 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 SLC9A3R1O14745 358 aaPredicted RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 HOXC11O43248 304 aaPredicted RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 CD48P09326 243 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ALOX5P09917 674 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 GFAPP14136 432 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 RPL9P32969 192 aaKnown RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 CSTF2P33240 577 aaKnown RBP eCLIP9.2□□□□□ -0.94
MSH5-205ENST00000395853 PSMC2P35998 433 aaKnown RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 RAP1GDS1P52306 607 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 AQP4P55087 323 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 GPR85P60893 370 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ZNF174Q15697 407 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 SLC35G1Q2M3R5 365 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 HP1BP3Q5SSJ5 553 aaPredicted RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 PXDC1Q5TGL8 231 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 LRRC6Q86X45 466 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 DGKHQ86XP1 1220 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 ZNF444Q8N0Y2 327 aaPredicted RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 AHI1Q8N157 1196 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 THAP11Q96EK4 314 aa9.2□□□□□ -0.94
MSH5-205ENST00000395853 REXO5Q96IC2 774 aaKnown RBP9.2□□□□□ -0.94
MSH5-205ENST00000395853 TUBB6Q9BUF5 446 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms