RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ARHGAP28Q9P2N2 729 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 HEY2Q9UBP5 337 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 CTNNAL1Q9UBT7 734 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 CIDEBQ9UHD4 219 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 PCSK1NQ9UHG2 260 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 SLC12A6Q9UHW9 1150 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 ZSCAN9O15535 394 aaPredicted RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 MMP3P08254 477 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ITGA2BP08514 1039 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 TPBGLP0DKB5 382 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 PYGMP11217 842 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 VDRP11473 427 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 COMTP21964 271 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 EEF1B2P24534 225 aaKnown RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 PIGHQ14442 188 aaPredicted RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 MYBPC3Q14896 1274 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 PCBP1Q15365 356 aaKnown RBP eCLIP5.9□□□□□ -1.46
RFFL-202ENST00000394597 DNAL1Q4LDG9 190 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 GLRA4Q5JXX5 417 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 DARS2Q6PI48 645 aaKnown RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 GLB1LQ6UWU2 654 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 STKLD1Q8NE28 680 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 FEZF2Q8TBJ5 459 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 LRRC15Q8TF66 581 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 SLC20A1Q8WUM9 679 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ZNF518BQ9C0D4 1074 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 RNPEPQ9H4A4 650 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 SAYSD1Q9NPB0 183 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 DMAC2Q9NW81 257 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ITGA11Q9UKX5 1188 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 DDX3XO00571 662 aaKnown RBP eCLIP5.9□□□□□ -1.471e-14■■■□□ 16.5
RFFL-202ENST00000394597 CFLARO15519 480 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 PJA2O43164 708 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 TLR2O60603 784 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 LYNP07948 512 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 INHBAP08476 426 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 KITP10721 976 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 S100A1P23297 94 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 EIF4BP23588 611 aaKnown RBP5.9□□□□□ -1.47
RFFL-202ENST00000394597 TMPRSS15P98073 1019 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 OVGP1Q12889 678 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 MKRN4PQ13434 485 aaPredicted RBP5.9□□□□□ -1.47
RFFL-202ENST00000394597 CNGA2Q16280 664 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 PARP6Q2NL67 630 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 THOC7Q6I9Y2 204 aaKnown RBP5.9□□□□□ -1.47
RFFL-202ENST00000394597 DAW1Q8N136 415 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 TAB3Q8N5C8 712 aaPredicted RBP5.9□□□□□ -1.47
RFFL-202ENST00000394597 DDI1Q8WTU0 396 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 ATP2A3Q93084 1043 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 C9orf72Q96LT7 481 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 CNBD2Q96M20 576 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 SERPINB12Q96P63 405 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 SGIP1Q9BQI5 828 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 XPNPEP1Q9NQW7 623 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 ETNK2Q9NVF9 386 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 STAP1Q9ULZ2 295 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 COL4A1P02462 1669 aa5.9□□□□□ -1.47
RFFL-202ENST00000394597 A0A0B4J269 797 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 A6NHS1 94 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 KRT38O76015 456 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SMPD1P17405 629 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 NCF2P19878 526 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 SKIV2L2P42285 1042 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 FLT3LGP49771 235 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CCR3P51677 355 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 MAPK7Q13164 816 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SPRED3Q2MJR0 410 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 HP1BP3Q5SSJ5 553 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 MEI1Q5TIA1 1274 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CXCL17Q6UXB2 119 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 NCCRP1Q6ZVX7 275 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 IFNL1Q8IU54 200 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SCN4BQ8IWT1 228 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 RCOR2Q8IZ40 523 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 FITM2Q8N6M3 262 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 EIF1ADQ8N9N8 165 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 UBA3Q8TBC4 463 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 GIPC3Q8TF64 312 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SPATA16Q9BXB7 569 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 HMX1Q9NP08 348 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 STARD7Q9NQZ5 370 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 EPS15L1Q9UBC2 864 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 MORF4L1Q9UBU8 362 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ZNF229Q9UJW7 825 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 DOLKQ9UPQ8 538 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ATMINO43313 823 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 CBFA2T3O75081 653 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 TADA2AO75478 443 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CABYRO75952 493 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 GJB1P08034 283 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 LCP1P13796 627 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PDGFRAP16234 1089 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 STMN1P16949 149 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 RGS7P49802 495 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 MRPS15P82914 257 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 STAT4Q14765 748 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CLEC16AQ2KHT3 1053 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 JADE1Q6IE81 842 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 RBM44Q6ZP01 1051 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms